Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   M0P24_RS03890 Genome accession   NZ_CP116957
Coordinates   769577..770017 (+) Length   146 a.a.
NCBI ID   WP_003065254.1    Uniprot ID   E0PEB8
Organism   Streptococcus pasteurianus strain WUSP070     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 764577..775017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS03860 (M0P24_03860) queE 764845..765558 (+) 714 WP_003065269.1 7-carboxy-7-deazaguanine synthase QueE -
  M0P24_RS03865 (M0P24_03865) queF 765571..766062 (+) 492 WP_003065267.1 preQ(1) synthase -
  M0P24_RS03870 (M0P24_03870) - 766118..766615 (-) 498 WP_111718248.1 DUF308 domain-containing protein -
  M0P24_RS03875 (M0P24_03875) gdhA 766861..768210 (+) 1350 WP_003065263.1 NADP-specific glutamate dehydrogenase -
  M0P24_RS03880 (M0P24_03880) - 768487..768996 (+) 510 WP_003065260.1 GNAT family N-acetyltransferase -
  M0P24_RS03885 (M0P24_03885) - 768993..769403 (+) 411 WP_003065257.1 peptide deformylase -
  M0P24_RS03890 (M0P24_03890) rcrR 769577..770017 (+) 441 WP_003065254.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  M0P24_RS03895 (M0P24_03895) rcrP 770021..771835 (+) 1815 WP_069788928.1 ABC transporter ATP-binding protein Regulator
  M0P24_RS03900 (M0P24_03900) rcrQ 771825..773597 (+) 1773 WP_013851965.1 ABC transporter ATP-binding protein Regulator
  M0P24_RS03905 (M0P24_03905) - 773864..774841 (+) 978 WP_013851964.1 alcohol dehydrogenase catalytic domain-containing protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17097.56 Da        Isoelectric Point: 8.4684

>NTDB_id=715134 M0P24_RS03890 WP_003065254.1 769577..770017(+) (rcrR) [Streptococcus pasteurianus strain WUSP070]
MHKKDPFSQFRDFINLAENRVHALAESHGVENLAGPQGFAVLYLHDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQIISSIEDKRYKQVVLTELGKSKAQNIQDFYDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=715134 M0P24_RS03890 WP_003065254.1 769577..770017(+) (rcrR) [Streptococcus pasteurianus strain WUSP070]
ATGCATAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAGCGGAAAATCGTGTCCATGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTGGCTGGTCCACAGGGATTTGCAGTGTTGTATCTCCATGATAATCCTGATAAAGAAATTTATA
TCAAGGATATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAATTATTTCGTCAATAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAAAA
CATTCAAGATTTCTATGATGAAATGCATAGACAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATTTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PEB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

55.944

97.945

0.548