Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   M0P24_RS03900 Genome accession   NZ_CP116957
Coordinates   771825..773597 (+) Length   590 a.a.
NCBI ID   WP_013851965.1    Uniprot ID   F5X758
Organism   Streptococcus pasteurianus strain WUSP070     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 766825..778597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS03875 (M0P24_03875) gdhA 766861..768210 (+) 1350 WP_003065263.1 NADP-specific glutamate dehydrogenase -
  M0P24_RS03880 (M0P24_03880) - 768487..768996 (+) 510 WP_003065260.1 GNAT family N-acetyltransferase -
  M0P24_RS03885 (M0P24_03885) - 768993..769403 (+) 411 WP_003065257.1 peptide deformylase -
  M0P24_RS03890 (M0P24_03890) rcrR 769577..770017 (+) 441 WP_003065254.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  M0P24_RS03895 (M0P24_03895) rcrP 770021..771835 (+) 1815 WP_069788928.1 ABC transporter ATP-binding protein Regulator
  M0P24_RS03900 (M0P24_03900) rcrQ 771825..773597 (+) 1773 WP_013851965.1 ABC transporter ATP-binding protein Regulator
  M0P24_RS03905 (M0P24_03905) - 773864..774841 (+) 978 WP_013851964.1 alcohol dehydrogenase catalytic domain-containing protein -
  M0P24_RS03910 (M0P24_03910) - 774831..775283 (+) 453 WP_003065246.1 MarR family winged helix-turn-helix transcriptional regulator -
  M0P24_RS03915 (M0P24_03915) - 775273..775908 (+) 636 WP_013851963.1 ABC transporter permease -
  M0P24_RS03920 (M0P24_03920) - 775898..776818 (+) 921 WP_248497724.1 glycine betaine ABC transporter substrate-binding protein -
  M0P24_RS03925 (M0P24_03925) - 776846..777604 (+) 759 WP_172456431.1 ABC transporter ATP-binding protein -
  M0P24_RS03930 (M0P24_03930) - 777597..778223 (+) 627 WP_013851960.1 ABC transporter permease -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65280.39 Da        Isoelectric Point: 5.2282

>NTDB_id=715136 M0P24_RS03900 WP_013851965.1 771825..773597(+) (rcrQ) [Streptococcus pasteurianus strain WUSP070]
MENKKKTSFYGRMKPYIRGFQLPFLLAVIGAIVSATVTVIGPDKLKEITNTITKGLTPTATGMIPGIDLDKVGKIALTLA
ILYVISAVVGYIQSFTVATIVQRFSQRLRKAIQTKIDKVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSTML
LIGSIFMMFHSNVSMALTAIGSVLIGFVLVMVIMGSSQPLFKRQQNNLAAINGYVEEIYSGHNVVTSYNAAGETSETFKK
LNTNLYKSMWQSQFLSGIMMPLMIFVGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEDEMEDESDKERQLSDVNGEVTFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQITIDGVDTRLMTREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVIAAAKAVGVHHFIMTLPKGYDT
YLDDSVTLSIGQKQLLTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDDLMQQGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=715136 M0P24_RS03900 WP_013851965.1 771825..773597(+) (rcrQ) [Streptococcus pasteurianus strain WUSP070]
ATGGAAAATAAGAAAAAAACATCTTTCTATGGCAGAATGAAGCCCTATATTAGAGGTTTCCAGCTTCCATTTCTTCTTGC
AGTGATTGGAGCAATTGTTTCTGCGACGGTTACGGTTATTGGACCTGATAAATTAAAAGAAATCACCAATACAATCACCA
AAGGTTTGACACCAACGGCGACTGGTATGATTCCAGGAATCGACTTGGATAAAGTTGGTAAAATTGCATTAACTTTGGCA
ATTTTATACGTTATTTCAGCAGTAGTTGGTTATATTCAAAGCTTTACCGTAGCGACTATCGTTCAACGTTTTTCACAACG
TTTACGTAAAGCTATTCAGACCAAAATTGACAAGGTTCCATTGAATTACTTTGATAGTCATTCGCAAGGGGACACCCTTT
CTCGTGTGACAAATGACGTTGACTTGCTTGGTCAATCGCTTAACCAAAGTTTGGGAACTTTGGTGACATCAACCATGTTA
TTGATTGGATCAATTTTCATGATGTTCCATTCAAATGTCAGCATGGCTCTAACAGCGATTGGGTCTGTTCTGATTGGTTT
TGTTTTGGTTATGGTTATCATGGGCTCATCACAACCATTGTTCAAACGTCAACAAAATAACTTGGCTGCGATTAATGGTT
ATGTTGAAGAAATTTACTCTGGTCATAATGTGGTAACAAGTTATAACGCTGCTGGTGAAACAAGCGAAACCTTTAAAAAA
TTAAACACCAATCTTTATAAATCAATGTGGCAATCACAGTTCTTGTCAGGTATTATGATGCCGCTTATGATTTTCGTTGG
GAACTTTGGTTATGTTATGGTCTGTGTGGTTGGTGCCGTTAAAGTTATCAATGGTGATATTACCATGGGGGATGTGGTTG
CCTTTATGACTTATGTTCGTATCTTCTCACAACCATTGTCACAAATTGCGCAAGCTTTCACACAAATGCAATCAGCAACA
GCTGCCATGAGCCGTGTCTTTGAATTCCTTGAAGAAGATGAAATGGAAGATGAGTCTGATAAGGAACGTCAACTTAGTGA
TGTTAATGGTGAAGTTACCTTTGATAATGTTTTCTTTGGTTATTCTAAGGATAAAACAATTATCCATGATTTCTCCGCTG
TGGCGAAACCTGGTCAGAAAGTTGCCATTGTTGGACCAACAGGCGCTGGTAAAACAACCATTGTTAACCTGCTCATGAAA
TTCTATGAAATCGATAAAGGTCAAATCACTATTGATGGTGTGGATACACGTTTGATGACACGTGAAGAAGTGCATGACCA
ATTCTCAATGGTGCTTCAAGATACGTGGTTGTTTGAAGGAACAATCAAAGAAAACTTGATTTACAATCAAGAAAATATTA
CAGACGAACAAGTTATTGCAGCGGCTAAGGCTGTTGGTGTTCATCACTTTATCATGACACTTCCAAAAGGTTATGACACT
TATCTTGATGATTCTGTAACACTTTCAATTGGTCAAAAACAACTCTTGACGATTGCGCGTGCTCTTTTGAAAGATTCACC
GCTCCTTATTTTGGATGAAGCAACGTCATCAGTTGATACACGTACTGAAGAATTGATTCAAAAAGCCATGGATAAATTGA
TGGAAGGTCGTACATCATTTGTTATCGCTCACCGTTTGTCAACGATTAGAAACGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATCATCGAACAAGGCAATCACGATGATTTGATGCAACAAGGCGGATTCTATGCTGACCTCTACAACTCACAATT
TGAAGTAGCTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(370-516)

ABC transporter transmembrane region (ABC_membrane)

(25-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5X758

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.311

100

0.736