Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   NQZ90_RS10685 Genome accession   NZ_CP102148
Coordinates   2208981..2209745 (+) Length   254 a.a.
NCBI ID   WP_257110260.1    Uniprot ID   A0AAW9DHI2
Organism   Streptococcus suis strain DNC15     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2203981..2214745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ90_RS10645 (NQZ90_10645) - 2204336..2204674 (+) 339 WP_024407917.1 DUF771 domain-containing protein -
  NQZ90_RS10650 (NQZ90_10650) - 2204737..2205858 (+) 1122 WP_014638877.1 site-specific integrase -
  NQZ90_RS10670 (NQZ90_10670) - 2206363..2207046 (-) 684 WP_024379536.1 YoaK family protein -
  NQZ90_RS10675 (NQZ90_10675) rlmH 2207071..2207550 (-) 480 WP_257110258.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NQZ90_RS10680 (NQZ90_10680) htrA 2207724..2208920 (+) 1197 WP_257110259.1 S1C family serine protease Regulator
  NQZ90_RS10685 (NQZ90_10685) spo0J 2208981..2209745 (+) 765 WP_257110260.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 29023.26 Da        Isoelectric Point: 9.1678

>NTDB_id=715029 NQZ90_RS10685 WP_257110260.1 2208981..2209745(+) (spo0J) [Streptococcus suis strain DNC15]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEASSYQKLINRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAIEEGQISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=715029 NQZ90_RS10685 WP_257110260.1 2208981..2209745(+) (spo0J) [Streptococcus suis strain DNC15]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCCATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCATC
CTCTTATCAAAAATTGATTAATAGAGGGTTAACGCATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTATAGAAGAAGGACAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-94)

HTH domain found in ParB protein (HTH_ParB)

(146-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.556

99.213

0.551