Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   NQZ90_RS03470 Genome accession   NZ_CP102148
Coordinates   713447..713746 (+) Length   99 a.a.
NCBI ID   WP_014637767.1    Uniprot ID   -
Organism   Streptococcus suis strain DNC15     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 708447..718746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ90_RS03450 (NQZ90_03450) - 709282..709875 (-) 594 WP_105155429.1 DUF1361 domain-containing protein -
  NQZ90_RS03455 (NQZ90_03455) metG 710031..712034 (+) 2004 WP_044685961.1 methionine--tRNA ligase -
  NQZ90_RS03460 (NQZ90_03460) coiA 712095..713048 (+) 954 WP_044669863.1 competence protein CoiA Machinery gene
  NQZ90_RS03465 (NQZ90_03465) - 713092..713457 (+) 366 WP_257110357.1 type II toxin-antitoxin system RelE/ParE family toxin -
  NQZ90_RS03470 (NQZ90_03470) HI0659 713447..713746 (+) 300 WP_014637767.1 helix-turn-helix domain-containing protein Machinery gene
  NQZ90_RS03475 (NQZ90_03475) pepF 713856..715658 (+) 1803 WP_024389335.1 oligoendopeptidase F Regulator
  NQZ90_RS03480 (NQZ90_03480) - 715660..716103 (+) 444 WP_024389334.1 hypothetical protein -
  NQZ90_RS03485 (NQZ90_03485) - 716114..716662 (+) 549 WP_024389333.1 DUF6630 family protein -
  NQZ90_RS03490 (NQZ90_03490) - 716737..717456 (+) 720 WP_044669888.1 O-methyltransferase -
  NQZ90_RS03495 (NQZ90_03495) prsA 717518..718501 (+) 984 WP_014637772.1 peptidylprolyl isomerase PrsA -

Sequence

Protein


Download         Length: 99 a.a.        Molecular weight: 11058.73 Da        Isoelectric Point: 7.2059

>NTDB_id=715005 NQZ90_RS03470 WP_014637767.1 713447..713746(+) (HI0659) [Streptococcus suis strain DNC15]
MENSAIGSNWQSVRSELFSEKEIIESDLRVAIMSELIKARHEQGVSQKRLEELSGVSQPVIARMETGKTSPQLDTILKVL
ASLGKTLAVVPLKQERHFQ

Nucleotide


Download         Length: 300 bp        

>NTDB_id=715005 NQZ90_RS03470 WP_014637767.1 713447..713746(+) (HI0659) [Streptococcus suis strain DNC15]
ATGGAAAATAGTGCAATTGGTAGTAACTGGCAATCGGTACGGTCTGAACTCTTCAGTGAGAAGGAAATCATAGAAAGTGA
TTTGCGTGTGGCAATTATGAGCGAACTGATAAAAGCAAGGCATGAACAGGGAGTAAGTCAGAAAAGACTAGAGGAGCTAA
GCGGGGTGAGTCAACCAGTTATTGCAAGAATGGAAACAGGTAAAACTAGTCCACAATTGGACACTATCTTGAAGGTATTG
GCTAGTCTAGGCAAAACTTTAGCAGTTGTGCCTTTGAAACAGGAACGACATTTTCAATAG

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(38-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

58.889

90.909

0.535