Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   NQZ91_RS07360 Genome accession   NZ_CP102145
Coordinates   1480992..1481762 (+) Length   256 a.a.
NCBI ID   WP_172023180.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1475992..1486762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS07345 (NQZ91_07345) - 1478363..1479040 (-) 678 WP_257117241.1 YoaK family protein -
  NQZ91_RS07350 (NQZ91_07350) rlmH 1479069..1479548 (-) 480 WP_105122447.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NQZ91_RS07355 (NQZ91_07355) htrA 1479740..1480924 (+) 1185 WP_257117242.1 S1C family serine protease Regulator
  NQZ91_RS07360 (NQZ91_07360) spo0J 1480992..1481762 (+) 771 WP_172023180.1 ParB/RepB/Spo0J family partition protein Regulator
  NQZ91_RS07365 (NQZ91_07365) dnaA 1481951..1483366 (+) 1416 WP_257117243.1 chromosomal replication initiator protein DnaA -
  NQZ91_RS07370 (NQZ91_07370) dnaN 1483508..1484644 (+) 1137 WP_172059407.1 DNA polymerase III subunit beta -
  NQZ91_RS07375 (NQZ91_07375) - 1484696..1485574 (+) 879 WP_257117244.1 diacylglycerol kinase family protein -
  NQZ91_RS07380 (NQZ91_07380) - 1485584..1485787 (+) 204 WP_024387288.1 DUF951 domain-containing protein -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 29345.08 Da        Isoelectric Point: 9.7233

>NTDB_id=714947 NQZ91_RS07360 WP_172023180.1 1480992..1481762(+) (spo0J) [Streptococcus suis strain DNS20]
MEELKKIAIKDIQTNPFQPRKHFDQEKLLELAQSIRENGIIQPIIVRKSSLIGYELLAGERRLRASQLAGLKEIPALVKE
LSDDQLMLQAIIENLQRSDLNPIEEAASYQKLIEKGLTHDEIAQIMGKSRPYISNLLRLLSLSNRTITAIETGEISQGHA
RLLIGLPESKQVYWIERIQQEQLSVRWLENALKKKKKQAPPKTNLFLKEQETELQKLLGTMVTIRQQKSGQGKLSLSFDS
NEEFERIINTLKKLCD

Nucleotide


Download         Length: 771 bp        

>NTDB_id=714947 NQZ91_RS07360 WP_172023180.1 1480992..1481762(+) (spo0J) [Streptococcus suis strain DNS20]
ATGGAAGAATTAAAAAAGATAGCGATTAAGGATATTCAAACAAATCCTTTTCAGCCACGAAAACATTTTGACCAAGAAAA
ATTATTGGAACTAGCCCAGTCTATCCGAGAAAATGGAATTATCCAACCGATTATCGTCCGAAAATCCTCTCTCATAGGCT
ATGAATTATTGGCTGGAGAACGACGTTTACGAGCCAGTCAATTAGCCGGTCTAAAAGAAATTCCAGCCCTTGTAAAGGAA
TTATCCGATGACCAGCTCATGTTGCAGGCTATTATCGAAAACCTCCAACGGTCGGACTTGAATCCCATTGAAGAAGCAGC
ATCTTATCAAAAATTGATTGAAAAGGGGCTGACCCACGATGAAATTGCTCAAATTATGGGCAAATCCCGCCCTTATATTT
CCAATCTTCTGCGTTTGCTGAGCCTCAGTAACAGGACCATTACTGCCATTGAAACCGGAGAAATCAGCCAGGGGCATGCC
CGTCTCTTAATCGGTCTTCCTGAATCGAAACAAGTCTACTGGATAGAGCGTATCCAACAGGAGCAATTAAGTGTTCGTTG
GCTGGAAAATGCTTTGAAAAAGAAGAAAAAACAAGCCCCACCGAAAACAAATCTCTTTTTGAAGGAGCAAGAAACTGAAT
TACAGAAACTCCTGGGAACCATGGTCACGATTAGACAGCAGAAATCTGGTCAGGGGAAGCTTAGCCTATCCTTTGATTCC
AACGAAGAATTCGAAAGAATTATCAACACCTTAAAAAAATTGTGTGACTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-193)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.941

98.828

0.543