Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   NQZ91_RS07355 Genome accession   NZ_CP102145
Coordinates   1479740..1480924 (+) Length   394 a.a.
NCBI ID   WP_257117242.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1474740..1485924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS07325 (NQZ91_07325) - 1475387..1477957 (+) 2571 WP_257117240.1 YfhO family protein -
  NQZ91_RS07345 (NQZ91_07345) - 1478363..1479040 (-) 678 WP_257117241.1 YoaK family protein -
  NQZ91_RS07350 (NQZ91_07350) rlmH 1479069..1479548 (-) 480 WP_105122447.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NQZ91_RS07355 (NQZ91_07355) htrA 1479740..1480924 (+) 1185 WP_257117242.1 S1C family serine protease Regulator
  NQZ91_RS07360 (NQZ91_07360) spo0J 1480992..1481762 (+) 771 WP_172023180.1 ParB/RepB/Spo0J family partition protein Regulator
  NQZ91_RS07365 (NQZ91_07365) dnaA 1481951..1483366 (+) 1416 WP_257117243.1 chromosomal replication initiator protein DnaA -
  NQZ91_RS07370 (NQZ91_07370) dnaN 1483508..1484644 (+) 1137 WP_172059407.1 DNA polymerase III subunit beta -
  NQZ91_RS07375 (NQZ91_07375) - 1484696..1485574 (+) 879 WP_257117244.1 diacylglycerol kinase family protein -
  NQZ91_RS07380 (NQZ91_07380) - 1485584..1485787 (+) 204 WP_024387288.1 DUF951 domain-containing protein -

Sequence

Protein


Download         Length: 394 a.a.        Molecular weight: 41361.39 Da        Isoelectric Point: 4.7557

>NTDB_id=714946 NQZ91_RS07355 WP_257117242.1 1479740..1480924(+) (htrA) [Streptococcus suis strain DNS20]
MKKYLKFIILFAFGFLGGISGYLVASSFQNPAAPQQAGSGETTISKVQYQNENSTTKAVEKVQDAVVSVINYQQPTPNSL
SSIFGTIESSDELAVAGEGSGVIYKKDGKDAYIVTNNHVIANAEKIDILLASGEKVSGQLVGADTYSDIAVIKIDAEKAH
SVAEFANSDSIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQTEDGQTISTNAIQTDTAINPGNSGGPLINIQGQ
VIGINSSKITSSSLANNGGVSIEGMGFAIPSNDAVSIINQLETNGKVVRPALGIHMVDLTNLSTIQLEKAGLANTDLTSG
VVVVSTQSGLPADGKLKTYDVITEINSKKIESKSDLQSALYKQKINDTITVTYYRQGKEEKVDIKLTHSTDDLS

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=714946 NQZ91_RS07355 WP_257117242.1 1479740..1480924(+) (htrA) [Streptococcus suis strain DNS20]
ATGAAAAAGTATTTGAAATTTATCATTCTATTCGCCTTTGGGTTTCTAGGAGGAATCAGTGGCTATCTGGTTGCGTCCTC
TTTCCAAAATCCCGCAGCTCCACAGCAAGCGGGGTCTGGTGAAACCACCATCAGCAAAGTTCAGTATCAAAATGAGAATT
CAACAACCAAGGCTGTGGAAAAAGTACAGGATGCCGTAGTATCTGTCATCAATTACCAGCAGCCTACACCAAATAGCCTC
AGCTCTATTTTTGGTACTATTGAAAGCTCCGATGAGCTGGCCGTGGCAGGAGAGGGATCTGGTGTTATATATAAAAAAGA
TGGCAAGGATGCCTACATTGTCACCAACAATCACGTTATTGCCAATGCTGAAAAAATTGACATTCTCTTAGCATCTGGTG
AGAAAGTTAGTGGACAGCTAGTGGGAGCAGACACCTATTCAGATATAGCCGTTATCAAGATCGATGCTGAGAAAGCCCAC
TCTGTCGCTGAATTTGCCAATTCAGACAGCATTAAGGTCGGAGAAACAGCCATCGCTATCGGTAGTCCTTTAGGTAGTGT
TTATGCCAATACCGTCACCCAGGGCATTATTTCCAGCCTTAGCCGGACTGTCACTTCTCAAACAGAGGACGGACAAACCA
TCTCCACCAATGCAATCCAAACAGATACAGCCATTAACCCAGGTAATTCTGGTGGCCCCCTCATCAATATTCAGGGTCAG
GTTATCGGAATCAATTCAAGTAAGATAACTTCAAGTTCTCTGGCCAATAATGGTGGTGTCTCTATAGAAGGTATGGGATT
TGCGATTCCTTCAAATGACGCTGTTTCTATTATCAATCAATTGGAAACAAATGGTAAGGTAGTTCGTCCAGCCTTGGGCA
TTCACATGGTCGACTTGACCAATCTGTCAACCATTCAATTAGAAAAAGCAGGTCTGGCAAATACAGATTTAACCTCAGGT
GTAGTAGTTGTTTCAACCCAGTCAGGCCTACCAGCTGATGGCAAATTAAAAACCTACGATGTCATTACTGAGATCAATAG
TAAGAAAATTGAGAGCAAGAGCGATTTACAGAGTGCCCTTTACAAACAAAAAATTAACGACACGATTACAGTCACCTATT
ACCGTCAAGGCAAAGAAGAGAAGGTTGACATAAAGTTGACACACTCTACGGACGACCTTTCTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(290-386)

Trypsin-like peptidase domain (Trypsin_2)

(99-244)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.506

100

0.607
  htrA Streptococcus gordonii str. Challis substr. CH1

59.494

100

0.596
  htrA Streptococcus pneumoniae Rx1

57.506

99.746

0.574
  htrA Streptococcus pneumoniae D39

57.506

99.746

0.574
  htrA Streptococcus pneumoniae R6

57.506

99.746

0.574
  htrA Streptococcus pneumoniae TIGR4

57.506

99.746

0.574
  htrA Streptococcus mitis NCTC 12261

57.506

99.746

0.574