Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   NQZ98_RS09875 Genome accession   NZ_CP102135
Coordinates   1942068..1943327 (-) Length   419 a.a.
NCBI ID   WP_024400223.1    Uniprot ID   -
Organism   Streptococcus suis strain M106471_S40     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1937068..1948327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ98_RS09855 (NQZ98_09855) dhaL 1938014..1938589 (+) 576 WP_024400221.1 dihydroxyacetone kinase subunit DhaL -
  NQZ98_RS09860 (NQZ98_09860) dhaM 1938586..1938960 (+) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  NQZ98_RS09865 (NQZ98_09865) - 1938970..1939680 (+) 711 WP_014736436.1 MIP/aquaporin family protein -
  NQZ98_RS09870 (NQZ98_09870) - 1940017..1941879 (-) 1863 WP_024400222.1 proline--tRNA ligase -
  NQZ98_RS09875 (NQZ98_09875) eeP 1942068..1943327 (-) 1260 WP_024400223.1 RIP metalloprotease RseP Regulator
  NQZ98_RS09880 (NQZ98_09880) - 1943337..1944143 (-) 807 WP_014637191.1 phosphatidate cytidylyltransferase -
  NQZ98_RS09885 (NQZ98_09885) - 1944153..1944908 (-) 756 WP_013730586.1 isoprenyl transferase -
  NQZ98_RS09890 (NQZ98_09890) yajC 1945022..1945345 (-) 324 WP_013730587.1 preprotein translocase subunit YajC -
  NQZ98_RS09895 (NQZ98_09895) - 1945455..1946747 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44917.22 Da        Isoelectric Point: 5.6974

>NTDB_id=714597 NQZ98_RS09875 WP_024400223.1 1942068..1943327(-) (eeP) [Streptococcus suis strain M106471_S40]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYRVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=714597 NQZ98_RS09875 WP_024400223.1 1942068..1943327(-) (eeP) [Streptococcus suis strain M106471_S40]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGTTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAGGGTTGATCACGACGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCGGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCGGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCAGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654

  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654