Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NQZ98_RS03760 Genome accession   NZ_CP102135
Coordinates   718354..719157 (+) Length   267 a.a.
NCBI ID   WP_014637679.1    Uniprot ID   G7SGQ3
Organism   Streptococcus suis strain M106471_S40     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 713354..724157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ98_RS03735 (NQZ98_03735) - 713783..714481 (-) 699 WP_141590556.1 amino acid ABC transporter permease -
  NQZ98_RS03740 (NQZ98_03740) - 714496..715335 (-) 840 WP_044668291.1 transporter substrate-binding domain-containing protein -
  NQZ98_RS03745 (NQZ98_03745) - 715346..716107 (-) 762 WP_002935839.1 amino acid ABC transporter ATP-binding protein -
  NQZ98_RS03750 (NQZ98_03750) micA 716301..717005 (+) 705 WP_002935840.1 response regulator YycF Regulator
  NQZ98_RS03755 (NQZ98_03755) micB 716998..718347 (+) 1350 WP_002935841.1 cell wall metabolism sensor histidine kinase VicK Regulator
  NQZ98_RS03760 (NQZ98_03760) vicX 718354..719157 (+) 804 WP_014637679.1 MBL fold metallo-hydrolase Regulator
  NQZ98_RS03765 (NQZ98_03765) vga(F) 719415..720800 (+) 1386 WP_014637680.1 ABC-F type ribosomal protection protein Vga(F) -
  NQZ98_RS03770 (NQZ98_03770) pbp2b 720892..722961 (+) 2070 WP_014637681.1 penicillin-binding protein PBP2B -
  NQZ98_RS03775 (NQZ98_03775) recR 722970..723566 (+) 597 WP_024399909.1 recombination mediator RecR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29673.78 Da        Isoelectric Point: 5.7755

>NTDB_id=714577 NQZ98_RS03760 WP_014637679.1 718354..719157(+) (vicX) [Streptococcus suis strain M106471_S40]
MIGKGFNYSILASGSSGNCFFLETDKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
TQADLGVGVDFQVYDTSPDTATPLTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=714577 NQZ98_RS03760 WP_014637679.1 718354..719157(+) (vicX) [Streptococcus suis strain M106471_S40]
ATGATCGGAAAAGGTTTTAATTATAGTATTTTAGCTTCGGGGTCCAGCGGGAATTGTTTTTTCCTAGAAACAGATAAAAA
GAAAATCTTAGTGGATGCTGGCTTATCAGGGAAAAAGATTACCAGTCTTTTGGCGGAAATTGATCGAAAGCCTGAGGATA
TTGATGCTATCCTGGTAACGCATGAACATAGCGATCACATCCATGGTATCGGTGTTTTAGCACGTAAGTATGGGATGGAT
ATTTATGCCAATGAATTGACCTGGCAGGCTATGGAGAGCAAATTGGGCAAGATTGATGTGGCTCAAAAACATATCTTCGA
ATTGGGTGCTATGAAGACTTTTGGCGACCTAGATATTGAGTCATTTGGTGTCAGTCATGATGCGGCCTGTCCGCAATTTT
ACCGTTTTATGAAGGATGACAAATCCTTTGTTATGTTGACGGATACAGGCTATGTCAGTGACCGCATGGTTGGAATTGTA
GAAAATGCCGATGCTTATTTGATTGAATCGAACCATGATATTGAAATTTTGCGCTCAGGTTCATATTCATGGAATTTGAA
GCAACGGATTTTGTCAGATAAGGGCCACCTTTGTAACGAAGACGGTGCTGACGCCATGATTCGCTCGTTGGGAAATCGGA
CAAAAAAGATTTACCTAGGGCATTTGTCAAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTTAATCAATTG
ACTCAGGCTGATTTAGGAGTTGGAGTGGATTTCCAAGTCTATGACACATCGCCAGATACAGCGACTCCCTTGACCAAGAT
TTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7SGQ3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.779

100

0.768