Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   NQU59_RS02465 Genome accession   NZ_CP102099
Coordinates   524747..525898 (+) Length   383 a.a.
NCBI ID   WP_005240377.1    Uniprot ID   N9PN35
Organism   Acinetobacter colistiniresistens strain C-214     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 519747..530898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQU59_RS02445 (NQU59_02445) - 520196..521386 (-) 1191 WP_257064840.1 hypothetical protein -
  NQU59_RS02450 (NQU59_02450) - 521452..523572 (-) 2121 WP_257064841.1 TonB-dependent copper receptor -
  NQU59_RS02455 (NQU59_02455) - 523645..524082 (-) 438 WP_257064842.1 DUF2946 family protein -
  NQU59_RS02460 (NQU59_02460) def 524094..524624 (-) 531 WP_004656477.1 peptide deformylase -
  NQU59_RS02465 (NQU59_02465) tsaP 524747..525898 (+) 1152 WP_005240377.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  NQU59_RS02470 (NQU59_02470) dprA 525909..527036 (+) 1128 WP_005240378.1 DNA-processing protein DprA Machinery gene
  NQU59_RS02475 (NQU59_02475) - 527072..527641 (+) 570 WP_257064843.1 Sua5/YciO/YrdC/YwlC family protein -
  NQU59_RS02480 (NQU59_02480) - 528058..528975 (-) 918 WP_257064844.1 ABC transporter permease -
  NQU59_RS02485 (NQU59_02485) - 528985..530091 (-) 1107 WP_257064846.1 ABC transporter permease -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 41810.08 Da        Isoelectric Point: 9.4196

>NTDB_id=714385 NQU59_RS02465 WP_005240377.1 524747..525898(+) (tsaP) [Acinetobacter colistiniresistens strain C-214]
MKKVLNGIHSFHALGLKKQLIAAAICAGLGMGVNFAHAASPNVSPPSVKVGAPHVYVVKKGDTLWDISGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDRLLLCSLNGKPLVGKDEGDGCDGIIRRYTGNTSTLRPQVRVEALNNSVPVIPLADIQQWLER
TSVLPADAIANTPYILGTADNRVIAGKGQSVYVRGKGLENGQRYGVFREGEPYVVLDPNGKKQVLGVELTQVASGVTIRN
ENDITTLELTESYNGEVRRGDRVMAEQDAMLPTLFYPVDAQQIKDGGKIIRVMGSIGTAAKNGVVTIDRGTADGVEIGQV
LSVYQDGEMIRDPKTKEKVKLPGQYLGSIMVFKSFDRISYAYVLESELPIKIGSNIKPPRLDD

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=714385 NQU59_RS02465 WP_005240377.1 524747..525898(+) (tsaP) [Acinetobacter colistiniresistens strain C-214]
ATGAAAAAGGTTTTAAACGGCATACACTCATTTCATGCCTTGGGGTTAAAAAAACAACTGATTGCTGCTGCGATTTGTGC
AGGACTGGGGATGGGAGTAAATTTTGCCCATGCAGCCAGCCCAAATGTCAGCCCACCCTCAGTTAAAGTCGGTGCCCCAC
ACGTTTATGTGGTGAAAAAAGGCGATACACTTTGGGATATCTCAGGGAAGTTTTTAAGCAAGCCATGGCGCTGGCCAGAA
ATCTGGGCAAGCAACAAACATGTCAAAAATCCGCACTGGATTTATCCAGGCGATCGCTTGCTGCTGTGCAGCTTGAACGG
TAAACCCTTAGTTGGTAAAGATGAAGGCGACGGTTGTGACGGAATTATCCGTCGTTATACGGGGAATACCTCAACATTAC
GCCCGCAAGTGCGTGTCGAAGCATTGAACAACAGCGTTCCAGTGATTCCTCTGGCCGATATTCAACAATGGCTGGAACGT
ACTTCAGTTCTGCCAGCGGATGCCATTGCCAACACTCCTTATATCCTGGGCACAGCAGATAACCGTGTCATCGCTGGTAA
AGGTCAGAGTGTTTATGTCCGAGGCAAAGGTCTGGAAAATGGCCAACGCTATGGGGTCTTCCGTGAAGGTGAACCTTATG
TGGTCTTAGATCCAAATGGTAAAAAGCAGGTCCTTGGTGTTGAACTGACCCAAGTCGCTTCAGGCGTTACCATTCGCAAT
GAAAATGACATCACCACGCTTGAACTCACGGAAAGTTATAACGGCGAAGTGCGACGTGGCGATCGGGTAATGGCCGAACA
AGATGCCATGTTACCAACTTTATTCTATCCCGTTGATGCTCAGCAGATCAAAGACGGCGGCAAAATCATTCGGGTGATGG
GTTCAATTGGTACAGCGGCCAAAAATGGCGTTGTAACGATTGATCGTGGCACCGCAGACGGCGTTGAAATCGGTCAGGTG
CTCAGTGTCTACCAAGATGGTGAAATGATCAGAGACCCAAAAACCAAAGAAAAAGTTAAACTACCAGGTCAATATCTGGG
AAGCATCATGGTCTTTAAGAGCTTTGATCGGATCAGCTATGCCTACGTGCTTGAAAGTGAACTGCCAATCAAGATTGGCT
CAAATATTAAGCCACCCCGCCTCGATGACTGA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(56-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9PN35

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

71.354

100

0.715