Detailed information NTG0714333

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NL419_RS22445
• Genome accession: NZ_CP116923
• Coordinates: 4446671..4447696 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MLI104K1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4441671..4452696

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NL419_RS22425 (NL419_022420)	metJ	4442732..4443049 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NL419_RS22430 (NL419_022425)	yiiX	4443233..4443841 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NL419_RS22435 (NL419_022430)	rpmE	4443902..4444114 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NL419_RS22440 (NL419_022435)	priA	4444317..4446515 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
NL419_RS22445 (NL419_022440)	cytR	4446671..4447696 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NL419_RS22450 (NL419_022445)	ftsN	4447788..4448747 (+)	960	WP_000068828.1	cell division protein FtsN	-
NL419_RS22455 (NL419_022450)	hslV	4448840..4449370 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NL419_RS22460 (NL419_022455)	hslU	4449380..4450711 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NL419_RS22465 (NL419_022460)	menA	4450778..4451704 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NL419_RS22470 (NL419_022465)	rraA	4451797..4452282 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NL419_RS22475 (NL419_022470)	zapB	4452367..4452612 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=714333 NL419_RS22445 WP_000644904.1 4446671..4447696(+) (cytR) [Escherichia coli strain MLI104K1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=714333 NL419_RS22445 WP_000644904.1 4446671..4447696(+) (cytR) [Escherichia coli strain MLI104K1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628