Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   NQZ84_RS09390 Genome accession   NZ_CP102094
Coordinates   1923642..1924901 (-) Length   419 a.a.
NCBI ID   WP_024401677.1    Uniprot ID   -
Organism   Streptococcus suis strain 12RC1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1918642..1929901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ84_RS09370 (NQZ84_09370) dhaL 1919472..1920047 (+) 576 WP_044668882.1 dihydroxyacetone kinase subunit DhaL -
  NQZ84_RS09375 (NQZ84_09375) dhaM 1920044..1920418 (+) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  NQZ84_RS09380 (NQZ84_09380) - 1920428..1921138 (+) 711 WP_014638689.1 MIP/aquaporin family protein -
  NQZ84_RS09385 (NQZ84_09385) - 1921217..1923079 (-) 1863 WP_044684027.1 proline--tRNA ligase -
  NQZ84_RS09390 (NQZ84_09390) eeP 1923642..1924901 (-) 1260 WP_024401677.1 M50 family metallopeptidase Regulator
  NQZ84_RS09395 (NQZ84_09395) - 1924911..1925717 (-) 807 WP_014638692.1 phosphatidate cytidylyltransferase -
  NQZ84_RS09400 (NQZ84_09400) - 1925727..1926482 (-) 756 WP_013730586.1 isoprenyl transferase -
  NQZ84_RS09405 (NQZ84_09405) yajC 1926596..1926919 (-) 324 WP_013730587.1 preprotein translocase subunit YajC -
  NQZ84_RS09410 (NQZ84_09410) - 1927029..1928321 (-) 1293 WP_002940128.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44932.32 Da        Isoelectric Point: 5.6974

>NTDB_id=714321 NQZ84_RS09390 WP_024401677.1 1923642..1924901(-) (eeP) [Streptococcus suis strain 12RC1]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFILLFFMQGGVANPSSNAVSITEGGALQVAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKTRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLVGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=714321 NQZ84_RS09390 WP_024401677.1 1923642..1924901(-) (eeP) [Streptococcus suis strain 12RC1]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGGCCAAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGACGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTCTTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGTGGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGTAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAACCCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGTGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAACCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAGTTTGGTTTGGTCTCTGTGTT
GGGGCTGATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TGATGAATATCCTAGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGTAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65

100

0.652

  eeP Streptococcus thermophilus LMD-9

65

100

0.652