Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NQZ84_RS07315 Genome accession   NZ_CP102094
Coordinates   1484651..1485454 (-) Length   267 a.a.
NCBI ID   WP_014637679.1    Uniprot ID   G7SGQ3
Organism   Streptococcus suis strain 12RC1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1479651..1490454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ84_RS07300 (NQZ84_07300) recR 1480242..1480838 (-) 597 WP_024399909.1 recombination mediator RecR -
  NQZ84_RS07305 (NQZ84_07305) pbp2b 1480847..1482916 (-) 2070 WP_257049620.1 penicillin-binding protein PBP2B -
  NQZ84_RS07310 (NQZ84_07310) vga(F) 1483008..1484393 (-) 1386 WP_014637680.1 ABC-F type ribosomal protection protein Vga(F) -
  NQZ84_RS07315 (NQZ84_07315) vicX 1484651..1485454 (-) 804 WP_014637679.1 MBL fold metallo-hydrolase Regulator
  NQZ84_RS07320 (NQZ84_07320) micB 1485461..1486810 (-) 1350 WP_002935841.1 cell wall metabolism sensor histidine kinase VicK Regulator
  NQZ84_RS07325 (NQZ84_07325) micA 1486803..1487507 (-) 705 WP_002935840.1 response regulator YycF Regulator
  NQZ84_RS07330 (NQZ84_07330) - 1487701..1488462 (+) 762 WP_044681329.1 amino acid ABC transporter ATP-binding protein -
  NQZ84_RS07335 (NQZ84_07335) - 1488473..1489312 (+) 840 WP_044681327.1 transporter substrate-binding domain-containing protein -
  NQZ84_RS07340 (NQZ84_07340) - 1489327..1490025 (+) 699 WP_013730248.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29673.78 Da        Isoelectric Point: 5.7755

>NTDB_id=714308 NQZ84_RS07315 WP_014637679.1 1484651..1485454(-) (vicX) [Streptococcus suis strain 12RC1]
MIGKGFNYSILASGSSGNCFFLETDKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
TQADLGVGVDFQVYDTSPDTATPLTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=714308 NQZ84_RS07315 WP_014637679.1 1484651..1485454(-) (vicX) [Streptococcus suis strain 12RC1]
ATGATCGGAAAAGGTTTTAATTATAGTATTTTAGCTTCGGGGTCCAGCGGGAATTGTTTTTTCCTAGAAACAGATAAAAA
GAAAATCTTAGTGGATGCTGGCTTATCAGGGAAAAAGATTACCAGTCTTTTGGCGGAAATTGATCGAAAGCCTGAGGATA
TTGATGCTATCCTGGTAACGCATGAACATAGCGATCACATCCATGGTATCGGTGTTTTAGCACGTAAGTATGGGATGGAT
ATTTATGCCAATGAATTGACCTGGCAGGCTATGGAGAGCAAATTGGGCAAGATTGATGTGGCTCAAAAACATATCTTCGA
ATTGGGTGCTATGAAGACTTTTGGCGACCTAGATATTGAGTCATTTGGTGTCAGTCATGATGCGGCCTGTCCGCAATTTT
ACCGTTTTATGAAGGATGACAAATCCTTTGTTATGTTGACGGATACAGGCTATGTCAGTGACCGCATGGTTGGAATTGTA
GAAAATGCCGATGCTTATTTGATTGAATCGAACCATGATATTGAAATTTTGCGCTCAGGTTCATATTCATGGAATTTGAA
GCAACGGATTTTGTCAGATAAGGGCCACCTTTGTAACGAAGACGGTGCTGACGCCATGATTCGCTCGTTGGGAAATCGGA
CAAAAAAGATTTACCTAGGGCATTTGTCAAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTTAATCAATTG
ACTCAGGCTGATTTAGGAGTTGGAGTGGATTTCCAAGTCTATGACACATCGCCAGATACAGCGACTCCCTTGACCAAGAT
TTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7SGQ3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.779

100

0.768