Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   PPM45_RS18400 Genome accession   NZ_CP116870
Coordinates   3575797..3576171 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. subtilis strain Master_strain     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3570797..3581171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM45_RS18375 - 3570961..3571122 (-) 162 WP_003227632.1 hypothetical protein -
  PPM45_RS18380 glpX 3571337..3572302 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  PPM45_RS18385 murAB 3572333..3573622 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  PPM45_RS18390 fsa 3574001..3574639 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  PPM45_RS18395 fbaA 3574759..3575616 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  PPM45_RS18400 letA 3575797..3576171 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  PPM45_RS18405 ywjG 3576337..3576858 (+) 522 WP_003242809.1 DUF2529 domain-containing protein -
  PPM45_RS18410 pyrG 3576940..3578547 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  PPM45_RS18415 rpoE 3578789..3579310 (-) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  PPM45_RS18420 acdA 3579493..3580632 (-) 1140 WP_003242719.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=713909 PPM45_RS18400 WP_003227621.1 3575797..3576171(-) (letA) [Bacillus subtilis subsp. subtilis strain Master_strain]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=713909 PPM45_RS18400 WP_003227621.1 3575797..3576171(-) (letA) [Bacillus subtilis subsp. subtilis strain Master_strain]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTGTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363