Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NPS17_RS06825 Genome accession   NZ_CP101985
Coordinates   1486592..1487395 (-) Length   267 a.a.
NCBI ID   WP_002262928.1    Uniprot ID   A0AAX1K323
Organism   Streptococcus mutans strain COCC33-14R     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1481592..1492395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS17_RS06815 (NPS17_06815) smc 1482254..1485790 (-) 3537 WP_002271900.1 chromosome segregation protein SMC -
  NPS17_RS06820 (NPS17_06820) rnc 1485790..1486485 (-) 696 WP_002266141.1 ribonuclease III -
  NPS17_RS06825 (NPS17_06825) vicX 1486592..1487395 (-) 804 WP_002262928.1 MBL fold metallo-hydrolase Regulator
  NPS17_RS06830 (NPS17_06830) vicK 1487392..1488744 (-) 1353 WP_002264821.1 cell wall metabolism sensor histidine kinase VicK Regulator
  NPS17_RS06835 (NPS17_06835) vicR 1488737..1489444 (-) 708 WP_002262930.1 response regulator YycF Regulator
  NPS17_RS06840 (NPS17_06840) - 1489797..1490579 (+) 783 WP_002262931.1 amino acid ABC transporter ATP-binding protein -
  NPS17_RS06845 (NPS17_06845) - 1490576..1491388 (+) 813 WP_002262932.1 transporter substrate-binding domain-containing protein -
  NPS17_RS06850 (NPS17_06850) - 1491406..1492110 (+) 705 WP_002262933.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29693.77 Da        Isoelectric Point: 6.1184

>NTDB_id=713582 NPS17_RS06825 WP_002262928.1 1486592..1487395(-) (vicX) [Streptococcus mutans strain COCC33-14R]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDGMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGIYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=713582 NPS17_RS06825 WP_002262928.1 1486592..1487395(-) (vicX) [Streptococcus mutans strain COCC33-14R]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCAGGCTTATCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATGGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTCAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGTTTTGTTATATTGACGGATACGGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTATCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

100

100

1