Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   NPS18_RS10070 Genome accession   NZ_CP101984
Coordinates   2032301..2033071 (+) Length   256 a.a.
NCBI ID   WP_002262649.1    Uniprot ID   -
Organism   Streptococcus mutans strain UA-159     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2027301..2038071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS18_RS10055 (NPS18_10055) - 2028925..2029587 (-) 663 WP_002262652.1 YoaK family protein -
  NPS18_RS10060 (NPS18_10060) rlmH 2029930..2030409 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NPS18_RS10065 (NPS18_10065) htrA 2030615..2031823 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  NPS18_RS10070 (NPS18_10070) spo0J 2032301..2033071 (+) 771 WP_002262649.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 29510.18 Da        Isoelectric Point: 10.1578

>NTDB_id=713547 NPS18_RS10070 WP_002262649.1 2032301..2033071(+) (spo0J) [Streptococcus mutans strain UA-159]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKTSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=713547 NPS18_RS10070 WP_002262649.1 2032301..2033071(+) (spo0J) [Streptococcus mutans strain UA-159]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAAACTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

100

100

1