Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   NPS18_RS02050 Genome accession   NZ_CP101984
Coordinates   386649..387374 (+) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans strain UA-159     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 381649..392374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS18_RS02025 (NPS18_02025) - 382152..383582 (+) 1431 WP_002262613.1 NCS2 family permease -
  NPS18_RS02030 (NPS18_02030) tsaE 383711..384154 (+) 444 WP_002272923.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  NPS18_RS02035 (NPS18_02035) brpA 384485..385705 (+) 1221 WP_214495087.1 biofilm formation/cell division transcriptional regulator BrpA -
  NPS18_RS02040 (NPS18_02040) - 385875..386168 (-) 294 WP_002268777.1 hypothetical protein -
  NPS18_RS02045 (NPS18_02045) - 386165..386584 (-) 420 WP_002262609.1 HIT family protein -
  NPS18_RS02050 (NPS18_02050) pptA 386649..387374 (+) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  NPS18_RS02055 (NPS18_02055) pptB 387377..388411 (+) 1035 WP_002279713.1 ABC transporter permease Regulator
  NPS18_RS02060 (NPS18_02060) ccrZ 388470..389252 (+) 783 WP_002262606.1 cell cycle regulator CcrZ -
  NPS18_RS02065 (NPS18_02065) trmB 389262..389897 (+) 636 WP_002262605.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  NPS18_RS02075 (NPS18_02075) rimP 390169..390660 (+) 492 WP_002262604.1 ribosome maturation factor RimP -
  NPS18_RS02080 (NPS18_02080) nusA 390696..391889 (+) 1194 WP_002262603.1 transcription termination factor NusA -
  NPS18_RS02085 (NPS18_02085) rnpM 391907..392203 (+) 297 WP_002263922.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=713483 NPS18_RS02050 WP_002262608.1 386649..387374(+) (pptA) [Streptococcus mutans strain UA-159]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=713483 NPS18_RS02050 WP_002262608.1 386649..387374(+) (pptA) [Streptococcus mutans strain UA-159]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACGCCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCCTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759