Detailed information NTG0713272

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NP434_RS19035
• Genome accession: NZ_CP101936
• Coordinates: 3715572..3716717 (+)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain BGSC 10A5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3710572..3721717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NP434_RS19015 (NP434_19015)	albF	3710588..3711868 (+)	1281	WP_032722698.1	pitrilysin family protein	-
NP434_RS19020 (NP434_19020)	albG	3711865..3712566 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NP434_RS19025 (NP434_19025)	ywhL	3712572..3713948 (-)	1377	WP_256683050.1	YncE family protein	-
NP434_RS19030 (NP434_19030)	ywhK	3713987..3715342 (-)	1356	WP_015250986.1	YncE family protein	-
NP434_RS19035 (NP434_19035)	rapF	3715572..3716717 (+)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
NP434_RS19040 (NP434_19040)	phrF	3716701..3716820 (+)	120	WP_085185514.1	phosphatase RapF inhibitor PhrF	Regulator
NP434_RS19045 (NP434_19045)	-	3716918..3717380 (+)	463	Protein_3698	YbaK/EbsC family protein	-
NP434_RS19050 (NP434_19050)	speB	3717412..3718284 (-)	873	WP_256683051.1	agmatinase	-
NP434_RS19055 (NP434_19055)	speE	3718345..3719175 (-)	831	WP_003227543.1	spermidine synthase	-
NP434_RS19060 (NP434_19060)	pbpG	3719378..3721453 (+)	2076	WP_256683052.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=713272 NP434_RS19035 WP_021480843.1 3715572..3716717(+) (rapF) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=713272 NP434_RS19035 WP_021480843.1 3715572..3716717(+) (rapF) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572