Detailed information    

insolico Bioinformatically predicted

Overview

Name   sinI   Type   Regulator
Locus tag   NP433_RS12265 Genome accession   NZ_CP101930
Coordinates   2420315..2420488 (+) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus subtilis strain BGSC 10A5     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context

Location: 2415315..2425488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP433_RS12250 (NP433_12250) gcvT 2416114..2417202 (-) 1089 WP_129092523.1 glycine cleavage system aminomethyltransferase GcvT -
  NP433_RS12255 (NP433_12255) hepAA 2417644..2419317 (+) 1674 WP_085186487.1 DEAD/DEAH box helicase -
  NP433_RS12260 (NP433_12260) yqhG 2419338..2420132 (+) 795 WP_003230200.1 YqhG family protein -
  NP433_RS12265 (NP433_12265) sinI 2420315..2420488 (+) 174 WP_003230187.1 anti-repressor SinI Regulator
  NP433_RS12270 (NP433_12270) sinR 2420522..2420857 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  NP433_RS12275 (NP433_12275) tasA 2420950..2421735 (-) 786 WP_212130175.1 biofilm matrix protein TasA -
  NP433_RS12280 (NP433_12280) sipW 2421799..2422371 (-) 573 WP_003246088.1 signal peptidase I SipW -
  NP433_RS12285 (NP433_12285) tapA 2422355..2423116 (-) 762 WP_015251716.1 amyloid fiber anchoring/assembly protein TapA -
  NP433_RS12290 (NP433_12290) yqzG 2423388..2423714 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  NP433_RS12295 (NP433_12295) spoIITA 2423756..2423935 (-) 180 WP_029726723.1 YqzE family protein -
  NP433_RS12300 (NP433_12300) comGG 2424007..2424381 (-) 375 WP_167408283.1 ComG operon protein ComGG Machinery gene
  NP433_RS12305 (NP433_12305) comGF 2424382..2424765 (-) 384 WP_032726158.1 ComG operon protein ComGF Machinery gene
  NP433_RS12310 (NP433_12310) comGE 2424791..2425138 (-) 348 WP_021480020.1 ComG operon protein 5 Machinery gene

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=713004 NP433_RS12265 WP_003230187.1 2420315..2420488(+) (sinI) [Bacillus subtilis strain BGSC 10A5]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=713004 NP433_RS12265 WP_003230187.1 2420315..2420488(+) (sinI) [Bacillus subtilis strain BGSC 10A5]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains

Predicted by InterproScan.

Anti-repressor SinI (SinI)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1