Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   PNF29_RS02110 Genome accession   NZ_CP116773
Coordinates   407420..407794 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain SRCM125727     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 402420..412794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PNF29_RS02090 (PNF29_02090) rpoE 402983..403489 (+) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -
  PNF29_RS02095 (PNF29_02095) pyrG 403731..405338 (+) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  PNF29_RS02105 (PNF29_02105) ywjG 406733..407254 (-) 522 WP_017696003.1 DUF2529 domain-containing protein -
  PNF29_RS02110 (PNF29_02110) letA 407420..407794 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  PNF29_RS02115 (PNF29_02115) fbaA 407975..408832 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  PNF29_RS02120 (PNF29_02120) fsa 408952..409590 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  PNF29_RS02125 (PNF29_02125) murAB 409969..411258 (+) 1290 WP_257986272.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  PNF29_RS02130 (PNF29_02130) glpX 411289..412254 (+) 966 WP_003242962.1 class II fructose-bisphosphatase -
  PNF29_RS02135 (PNF29_02135) - 412469..412630 (+) 162 WP_003227632.1 hypothetical protein -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=712964 PNF29_RS02110 WP_003227621.1 407420..407794(+) (letA) [Bacillus subtilis strain SRCM125727]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=712964 PNF29_RS02110 WP_003227621.1 407420..407794(+) (letA) [Bacillus subtilis strain SRCM125727]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363