Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NPA43_RS05495 Genome accession   NZ_CP101833
Coordinates   1120851..1121048 (+) Length   65 a.a.
NCBI ID   WP_099728278.1    Uniprot ID   -
Organism   Bacillus pumilus strain NDY-10     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1115851..1126048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPA43_RS05465 (NPA43_05465) - 1116272..1116451 (+) 180 WP_041110112.1 YjzC family protein -
  NPA43_RS05470 (NPA43_05470) - 1116623..1117888 (+) 1266 WP_256499459.1 MFS transporter -
  NPA43_RS05475 (NPA43_05475) - 1117985..1118179 (-) 195 WP_034322948.1 YjzD family protein -
  NPA43_RS05480 (NPA43_05480) - 1118392..1119132 (+) 741 WP_099728281.1 hypothetical protein -
  NPA43_RS05485 (NPA43_05485) - 1119208..1119786 (+) 579 WP_099728280.1 nad binding enzyme -
  NPA43_RS05490 (NPA43_05490) med 1119877..1120839 (+) 963 WP_099728279.1 BMP family ABC transporter substrate-binding protein Regulator
  NPA43_RS05495 (NPA43_05495) comZ 1120851..1121048 (+) 198 WP_099728278.1 ComZ family protein Regulator
  NPA43_RS05500 (NPA43_05500) - 1121058..1121291 (-) 234 WP_099728277.1 hypothetical protein -
  NPA43_RS05505 (NPA43_05505) - 1121461..1122399 (+) 939 WP_099728276.1 beta-ketoacyl-ACP synthase III -
  NPA43_RS05510 (NPA43_05510) fabF 1122421..1123662 (+) 1242 WP_099728275.1 beta-ketoacyl-ACP synthase II -
  NPA43_RS05515 (NPA43_05515) - 1123740..1124534 (+) 795 WP_230030909.1 DUF2268 domain-containing protein -
  NPA43_RS05520 (NPA43_05520) - 1124705..1125685 (+) 981 WP_099728273.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7390.43 Da        Isoelectric Point: 4.2412

>NTDB_id=712217 NPA43_RS05495 WP_099728278.1 1120851..1121048(+) (comZ) [Bacillus pumilus strain NDY-10]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAESEKATQ

Nucleotide


Download         Length: 198 bp        

>NTDB_id=712217 NPA43_RS05495 WP_099728278.1 1120851..1121048(+) (comZ) [Bacillus pumilus strain NDY-10]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCCATGAAGTATTTCCCGCAGGCAAAAGAAGAATTAGATAAAGC
GGGGATTCAGCTTGAGCCTGAAGCTCTTCAGCCGCTTCTATCATTATTTACATCGGTCATGCAAGAGGCGTATGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACACAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677