Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NPA43_RS05490 Genome accession   NZ_CP101833
Coordinates   1119877..1120839 (+) Length   320 a.a.
NCBI ID   WP_099728279.1    Uniprot ID   A0A2G8IR19
Organism   Bacillus pumilus strain NDY-10     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1114877..1125839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPA43_RS05460 (NPA43_05460) argF 1115216..1116166 (+) 951 WP_099728283.1 ornithine carbamoyltransferase -
  NPA43_RS05465 (NPA43_05465) - 1116272..1116451 (+) 180 WP_041110112.1 YjzC family protein -
  NPA43_RS05470 (NPA43_05470) - 1116623..1117888 (+) 1266 WP_256499459.1 MFS transporter -
  NPA43_RS05475 (NPA43_05475) - 1117985..1118179 (-) 195 WP_034322948.1 YjzD family protein -
  NPA43_RS05480 (NPA43_05480) - 1118392..1119132 (+) 741 WP_099728281.1 hypothetical protein -
  NPA43_RS05485 (NPA43_05485) - 1119208..1119786 (+) 579 WP_099728280.1 nad binding enzyme -
  NPA43_RS05490 (NPA43_05490) med 1119877..1120839 (+) 963 WP_099728279.1 BMP family ABC transporter substrate-binding protein Regulator
  NPA43_RS05495 (NPA43_05495) comZ 1120851..1121048 (+) 198 WP_099728278.1 ComZ family protein Regulator
  NPA43_RS05500 (NPA43_05500) - 1121058..1121291 (-) 234 WP_099728277.1 hypothetical protein -
  NPA43_RS05505 (NPA43_05505) - 1121461..1122399 (+) 939 WP_099728276.1 beta-ketoacyl-ACP synthase III -
  NPA43_RS05510 (NPA43_05510) fabF 1122421..1123662 (+) 1242 WP_099728275.1 beta-ketoacyl-ACP synthase II -
  NPA43_RS05515 (NPA43_05515) - 1123740..1124534 (+) 795 WP_230030909.1 DUF2268 domain-containing protein -
  NPA43_RS05520 (NPA43_05520) - 1124705..1125685 (+) 981 WP_099728273.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 320 a.a.        Molecular weight: 35798.67 Da        Isoelectric Point: 5.2594

>NTDB_id=712216 NPA43_RS05490 WP_099728279.1 1119877..1120839(+) (med) [Bacillus pumilus strain NDY-10]
MKYQRLVMIFSFLLLLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGSKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVDLYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIAYYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=712216 NPA43_RS05490 WP_099728279.1 1119877..1120839(+) (med) [Bacillus pumilus strain NDY-10]
ATGAAGTACCAACGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGACA
TATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTACTAA
GTATTCAATCGACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATCATTGGCCATGGCAATGAATACAGCGAAATTTTTAACTTGATCAGTGAAGA
TTATCCCAAAACACAATTTATTACGGTCAATGGATCCAAGCCTCAGGCAGACAATGTCACAAACGTGACGTTTAAAGGAG
AAGCCATGGGCTTTTTCGGAGGCATGACAGCAGCGCATATGTCAAAAACCAAAAAGATTGGTATTCTTGCTACATACGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGCGCAAAATATCAAGATGAACATGTGCAAGTGCTAGCGGAATTTGTCGA
AAACTGGGACGATGCTGACAAAGCTGTGGATCTGTATCAAAAATTGAAAAAACAAGGCGTAGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCTATCGGGTATGTCACCGATCAATCC
AACCTCGGAAGTCATACCGTCTTAACGAGCACAGTACAGCATGTCGATAAAGCGTATAGTATCATTGCGAAGAAGTTTAA
TGAAGGCAAGCTAAACGAACAAGATGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCTCAA
CCATTGACCGCGCTTTTGTGAAAGACATTGAGAGTGATATTGCGTATTACAAAAAAACAGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G8IR19

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.217

97.813

0.628