Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | NPA43_RS00585 | Genome accession | NZ_CP101833 |
| Coordinates | 107178..109613 (+) | Length | 811 a.a. |
| NCBI ID | WP_034323269.1 | Uniprot ID | A0A2G8IRB8 |
| Organism | Bacillus pumilus strain NDY-10 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 102178..114613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPA43_RS00570 (NPA43_00570) | - | 105049..105513 (+) | 465 | WP_034323278.1 | CtsR family transcriptional regulator | - |
| NPA43_RS00575 (NPA43_00575) | - | 105528..106085 (+) | 558 | WP_180275544.1 | UvrB/UvrC motif-containing protein | - |
| NPA43_RS00580 (NPA43_00580) | - | 106090..107181 (+) | 1092 | WP_099728204.1 | protein arginine kinase | - |
| NPA43_RS00585 (NPA43_00585) | clpC | 107178..109613 (+) | 2436 | WP_034323269.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| NPA43_RS00590 (NPA43_00590) | radA | 109707..111086 (+) | 1380 | WP_105928548.1 | DNA repair protein RadA | Machinery gene |
| NPA43_RS00595 (NPA43_00595) | disA | 111089..112168 (+) | 1080 | WP_099728202.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| NPA43_RS00600 (NPA43_00600) | - | 112322..113422 (+) | 1101 | WP_256499213.1 | PIN/TRAM domain-containing protein | - |
| NPA43_RS00605 (NPA43_00605) | ispD | 113436..114125 (+) | 690 | WP_099728201.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| NPA43_RS00610 (NPA43_00610) | ispF | 114129..114605 (+) | 477 | WP_099728200.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90023.75 Da Isoelectric Point: 6.2469
>NTDB_id=712203 NPA43_RS00585 WP_034323269.1 107178..109613(+) (clpC) [Bacillus pumilus strain NDY-10]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=712203 NPA43_RS00585 WP_034323269.1 107178..109613(+) (clpC) [Bacillus pumilus strain NDY-10]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGAACAGAACACATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACGGAGCTTTCTATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTGTTGCAGCTGCTTGGGAGCAATGAAACTGGTGCATCAGCGGCAGGATCGAATAGCAATGCAAAT
ACACCAACATTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
TAAAGAAATTCAGCGTGTCATTGAGGTACTAAGCAGAAGAACAAAGAATAACCCTGTTCTGATTGGTGAGCCTGGTGTTG
GTAAAACCGCGATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTGCGTGATAAACGAGTG
ATGACACTTGATATGGGAACCGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCGTCTAATATTCTGAAACCATCCCTGGCACGTGGTGAGCTTCAATGTATCGGGGCTACAACGTTAGATGAG
TACCGTAAATATATCGAGAAGGATGCAGCACTTGAACGTCGTTTCCAACCAATTCAAGTGGATCAGCCGTCCGTTGATGA
AAGTATTCAAATCTTGAGAGGTCTTAGAGATCGTTATGAAGCACATCACCGTGTGTCCATTACAGATGAAGCGATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGATCTAATTGATGAGGCAGGT
TCGAAGGTACGCTTACGTTCATTCACGACACCGCCTAACCTAAAGGAACTAGAGCAAAAGCTGGATGAAGTACGTAAGGA
AAAGGATGCGGCTGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCCCTTCGTGACACAGAGCAGCGCTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCGTGGAAAGAAAAGCAGGGACAAGAGAATTCTGAGGTATCTGTAGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCGAAAATTGCTCAAACCGAAACAGATAAGCTTCTGAATATGGAACAATTGCT
CCATTCTCGCGTGATTGGTCAGGATGAAGCGGTTGTCGCTGTAGCGAAAGCCGTGAGACGTGCGCGCGCTGGTCTAAAAG
ACCCGAAACGTCCAATTGGCTCCTTTATCTTCTTAGGTCCAACAGGGGTGGGTAAGACTGAGCTTGCGAGAGCACTGGCC
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATTGATATGTCTGAATACATGGAGAAACATTCTACATCAAGACT
TGTGGGATCACCTCCAGGCTATGTGGGCTATGATGAAGGTGGCCAGCTGACGGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGATGAGATTGAAAAGGCGCATCCTGATGTGTTTAATATCTTACTGCAAGTGTTAGAAGATGGCCGTCTT
ACTGATTCTAAAGGACGTACAGTTGACTTTAGAAATACTATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAACTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGT
TGAAACGTGCGTTTAGACCGGAATTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTAACAAAGCGGTTAAAAGAGCAAGACCTGTCAATTGAACTGACAGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGACCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TTGAGGATCGACTTTCTGAGGAATTGCTGAGAGGTAATATTGAAAAGGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGAACAGAACACATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACGGAGCTTTCTATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTGTTGCAGCTGCTTGGGAGCAATGAAACTGGTGCATCAGCGGCAGGATCGAATAGCAATGCAAAT
ACACCAACATTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
TAAAGAAATTCAGCGTGTCATTGAGGTACTAAGCAGAAGAACAAAGAATAACCCTGTTCTGATTGGTGAGCCTGGTGTTG
GTAAAACCGCGATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTGCGTGATAAACGAGTG
ATGACACTTGATATGGGAACCGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCGTCTAATATTCTGAAACCATCCCTGGCACGTGGTGAGCTTCAATGTATCGGGGCTACAACGTTAGATGAG
TACCGTAAATATATCGAGAAGGATGCAGCACTTGAACGTCGTTTCCAACCAATTCAAGTGGATCAGCCGTCCGTTGATGA
AAGTATTCAAATCTTGAGAGGTCTTAGAGATCGTTATGAAGCACATCACCGTGTGTCCATTACAGATGAAGCGATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGATCTAATTGATGAGGCAGGT
TCGAAGGTACGCTTACGTTCATTCACGACACCGCCTAACCTAAAGGAACTAGAGCAAAAGCTGGATGAAGTACGTAAGGA
AAAGGATGCGGCTGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCCCTTCGTGACACAGAGCAGCGCTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCGTGGAAAGAAAAGCAGGGACAAGAGAATTCTGAGGTATCTGTAGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCGAAAATTGCTCAAACCGAAACAGATAAGCTTCTGAATATGGAACAATTGCT
CCATTCTCGCGTGATTGGTCAGGATGAAGCGGTTGTCGCTGTAGCGAAAGCCGTGAGACGTGCGCGCGCTGGTCTAAAAG
ACCCGAAACGTCCAATTGGCTCCTTTATCTTCTTAGGTCCAACAGGGGTGGGTAAGACTGAGCTTGCGAGAGCACTGGCC
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATTGATATGTCTGAATACATGGAGAAACATTCTACATCAAGACT
TGTGGGATCACCTCCAGGCTATGTGGGCTATGATGAAGGTGGCCAGCTGACGGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGATGAGATTGAAAAGGCGCATCCTGATGTGTTTAATATCTTACTGCAAGTGTTAGAAGATGGCCGTCTT
ACTGATTCTAAAGGACGTACAGTTGACTTTAGAAATACTATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAACTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGT
TGAAACGTGCGTTTAGACCGGAATTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTAACAAAGCGGTTAAAAGAGCAAGACCTGTCAATTGAACTGACAGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGACCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TTGAGGATCGACTTTCTGAGGAATTGCTGAGAGGTAATATTGAAAAGGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.178 |
100 |
0.962 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.005 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.556 |
99.877 |
0.455 |
| clpC | Streptococcus pneumoniae D39 |
45.556 |
99.877 |
0.455 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.556 |
99.877 |
0.455 |
| clpC | Streptococcus mutans UA159 |
43.556 |
100 |
0.45 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.229 |
87.916 |
0.433 |
| clpE | Streptococcus mutans UA159 |
53.478 |
79.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae R6 |
52.868 |
79.531 |
0.42 |