Detailed information NTG0711949

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: POF57_RS10750
• Genome accession: NZ_CP116714
• Coordinates: 2099539..2100648 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain A909 Cas9 AEKO
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2094539..2105648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
POF57_RS10725 (POF57_10725)	-	2094911..2095750 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
POF57_RS10730 (POF57_10730)	pgsA	2095750..2096292 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
POF57_RS10735 (POF57_10735)	-	2096415..2097698 (-)	1284	WP_000217765.1	pitrilysin family protein	-
POF57_RS10740 (POF57_10740)	-	2097700..2098944 (-)	1245	WP_000706190.1	pitrilysin family protein	-
POF57_RS10745 (POF57_10745)	yaaA	2099183..2099536 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
POF57_RS10750 (POF57_10750)	recF	2099539..2100648 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
POF57_RS10755 (POF57_10755)	-	2100660..2101526 (-)	867	WP_000398683.1	GRP family sugar transporter	-
POF57_RS10760 (POF57_10760)	-	2101582..2102244 (-)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
POF57_RS10765 (POF57_10765)	guaB	2102319..2103800 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
POF57_RS10770 (POF57_10770)	-	2103957..2104442 (-)	486	WP_001034427.1	arginine repressor	-
POF57_RS10775 (POF57_10775)	-	2104452..2105132 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=711949 POF57_RS10750 WP_000264870.1 2099539..2100648(+) (recF) [Streptococcus agalactiae strain A909 Cas9 AEKO]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=711949 POF57_RS10750 WP_000264870.1 2099539..2100648(+) (recF) [Streptococcus agalactiae strain A909 Cas9 AEKO]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447