Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NPA28_RS06130 Genome accession   NZ_CP101718
Coordinates   1242202..1242393 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus halotolerans strain S-5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1237202..1247393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPA28_RS06100 (NPA28_06100) argF 1238039..1239011 (+) 973 Protein_1145 ornithine carbamoyltransferase -
  NPA28_RS06105 (NPA28_06105) - 1239097..1239276 (+) 180 WP_003239319.1 YjzC family protein -
  NPA28_RS06110 (NPA28_06110) - 1239322..1239507 (-) 186 WP_010333727.1 YjzD family protein -
  NPA28_RS06115 (NPA28_06115) - 1239766..1240503 (+) 738 WP_217827154.1 hypothetical protein -
  NPA28_RS06120 (NPA28_06120) - 1240580..1241143 (+) 564 WP_256766964.1 hypothetical protein -
  NPA28_RS06125 (NPA28_06125) med 1241234..1242187 (+) 954 WP_044156402.1 BMP family ABC transporter substrate-binding protein Regulator
  NPA28_RS06130 (NPA28_06130) comZ 1242202..1242393 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NPA28_RS06135 (NPA28_06135) - 1242423..1242653 (-) 231 WP_082687943.1 hypothetical protein -
  NPA28_RS06140 (NPA28_06140) fabH 1242819..1243757 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  NPA28_RS06145 (NPA28_06145) fabF 1243780..1245018 (+) 1239 WP_217827152.1 beta-ketoacyl-ACP synthase II -
  NPA28_RS06150 (NPA28_06150) - 1245098..1245883 (+) 786 WP_044156399.1 DUF2268 domain-containing protein -
  NPA28_RS06155 (NPA28_06155) appD 1246074..1247060 (+) 987 WP_044156398.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=711741 NPA28_RS06130 WP_003224559.1 1242202..1242393(+) (comZ) [Bacillus halotolerans strain S-5]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=711741 NPA28_RS06130 WP_003224559.1 1242202..1242393(+) (comZ) [Bacillus halotolerans strain S-5]
ATGCAGCACGAAAAATCACTTGAGTTTTTGCAAATAGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTTGAAAAATC
AGGAATAGAGCTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGGCGGAAGCCTATGAGCTGG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1