Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   POF65_RS03330 Genome accession   NZ_CP116706
Coordinates   585900..586079 (+) Length   59 a.a.
NCBI ID   WP_000965651.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain A909 sCas9     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 580900..591079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  POF65_RS03295 (POF65_03295) - 582518..582910 (+) 393 WP_000889198.1 DUF1366 domain-containing protein -
  POF65_RS03300 (POF65_03300) - 582933..583061 (+) 129 WP_000973385.1 hypothetical protein -
  POF65_RS03305 (POF65_03305) - 583070..583372 (+) 303 WP_001017826.1 hypothetical protein -
  POF65_RS03310 (POF65_03310) - 583365..583592 (+) 228 WP_000609111.1 phage holin -
  POF65_RS03315 (POF65_03315) - 583718..585049 (+) 1332 WP_000257237.1 GH25 family lysozyme -
  POF65_RS03320 (POF65_03320) - 585311..585481 (-) 171 WP_000356856.1 hypothetical protein -
  POF65_RS03325 (POF65_03325) - 585617..585742 (-) 126 WP_017285425.1 hypothetical protein -
  POF65_RS03330 (POF65_03330) prx 585900..586079 (+) 180 WP_000965651.1 hypothetical protein Regulator
  POF65_RS03335 (POF65_03335) - 586485..586682 (+) 198 WP_001290370.1 hypothetical protein -
  POF65_RS03340 (POF65_03340) - 586726..587658 (-) 933 WP_000254063.1 dihydroorotate oxidase -
  POF65_RS03345 (POF65_03345) - 587845..589080 (-) 1236 WP_001185392.1 aminoacyltransferase -
  POF65_RS03350 (POF65_03350) - 589099..590310 (-) 1212 WP_000285508.1 aminoacyltransferase -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 7035.07 Da        Isoelectric Point: 4.3690

>NTDB_id=711019 POF65_RS03330 WP_000965651.1 585900..586079(+) (prx) [Streptococcus agalactiae strain A909 sCas9]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPHEKVREEEVVTVERVEDVMRELE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=711019 POF65_RS03330 WP_000965651.1 585900..586079(+) (prx) [Streptococcus agalactiae strain A909 sCas9]
ATGTTATACATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGAAGAAGAGGTTGTGACAGTTGAGAGAGTGGAAGATG
TTATGAGAGAATTGGAGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

66.102

100

0.661
  prx Streptococcus pyogenes MGAS315

66.102

100

0.661
  prx Streptococcus pyogenes MGAS8232

67.241

98.305

0.661
  prx Streptococcus pyogenes MGAS315

65.517

98.305

0.644
  prx Streptococcus pyogenes MGAS315

83.721

72.881

0.61
  prx Streptococcus pyogenes MGAS315

71.429

71.186

0.508
  prx Streptococcus pyogenes MGAS315

69.767

72.881

0.508