Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NNG64_RS05935 Genome accession   NZ_CP101610
Coordinates   1118022..1118822 (+) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus siamensis strain WYJ-E14     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1113022..1123822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NNG64_RS05915 (NNG64_05905) - 1113145..1113990 (+) 846 WP_060964789.1 TlyA family RNA methyltransferase -
  NNG64_RS05920 (NNG64_05910) argR 1114087..1114536 (+) 450 WP_003153173.1 transcriptional regulator AhrC/ArgR -
  NNG64_RS05925 (NNG64_05915) recN 1114568..1116298 (+) 1731 WP_060964790.1 DNA repair protein RecN Machinery gene
  NNG64_RS05930 (NNG64_05920) spoIVB 1116462..1117742 (+) 1281 WP_060964791.1 SpoIVB peptidase -
  NNG64_RS05935 (NNG64_05925) spo0A 1118022..1118822 (+) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  NNG64_RS05940 (NNG64_05930) alr 1118965..1120146 (-) 1182 WP_060964792.1 alanine racemase -
  NNG64_RS05945 (NNG64_05935) - 1120332..1120544 (-) 213 WP_060964793.1 spore germination protein -
  NNG64_RS05950 (NNG64_05940) - 1120669..1120881 (-) 213 WP_060965136.1 spore germination protein -
  NNG64_RS05955 (NNG64_05945) - 1121006..1122124 (-) 1119 WP_016939012.1 NADH-dependent flavin oxidoreductase -
  NNG64_RS05960 (NNG64_05950) - 1122219..1122362 (-) 144 WP_223152353.1 hypothetical protein -
  NNG64_RS05965 (NNG64_05955) - 1122649..1123281 (-) 633 WP_016939014.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=710852 NNG64_RS05935 WP_003153177.1 1118022..1118822(+) (spo0A) [Bacillus siamensis strain WYJ-E14]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=710852 NNG64_RS05935 WP_003153177.1 1118022..1118822(+) (spo0A) [Bacillus siamensis strain WYJ-E14]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTAATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAAAATCCTGATGTGCTCG
TTTTAGATATTATTATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGGCTCCGTGAATCAGAGCTTGAGAAACAGCCG
AACGTTATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGCGTCACACACCGTGCGC
CGTCTGCACAAAGCAGTATCATCCGCAGCCAGCCGGAGCCGAAACGGAAAAATCTCGATGCCAGTATTACAAGCATTATC
CATGAAATCGGTGTGCCTGCCCATATTAAAGGCTATCTTTATTTGCGGGAAGCCATTTCCATGGTGTACAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCGATTGAAGTCGCTTGGAGCAGGGGAAATATTGATTCCATTTCTTCGCTGTTCGGGTATACCGTAAGC
ATGACCAAAGCAAAACCAACCAACTCAGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97