Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NNG64_RS01975 Genome accession   NZ_CP101610
Coordinates   389991..390944 (+) Length   317 a.a.
NCBI ID   WP_060963606.1    Uniprot ID   -
Organism   Bacillus siamensis strain WYJ-E14     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 384991..395944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NNG64_RS01950 (NNG64_01950) - 385036..386469 (+) 1434 WP_162492439.1 HAMP domain-containing sensor histidine kinase -
  NNG64_RS01955 (NNG64_01955) rapC 386623..387771 (+) 1149 WP_045926250.1 tetratricopeptide repeat protein Regulator
  NNG64_RS01960 (NNG64_01960) phrC 387755..387874 (+) 120 WP_016937261.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NNG64_RS01965 (NNG64_01965) - 388017..388115 (-) 99 WP_016937260.1 YjcZ family sporulation protein -
  NNG64_RS01970 (NNG64_01970) - 388211..389575 (-) 1365 WP_060963607.1 aspartate kinase -
  NNG64_RS01975 (NNG64_01975) ceuB 389991..390944 (+) 954 WP_060963606.1 ABC transporter permease Machinery gene
  NNG64_RS01980 (NNG64_01980) - 390934..391881 (+) 948 WP_045926247.1 iron chelate uptake ABC transporter family permease subunit -
  NNG64_RS01985 (NNG64_01985) - 391875..392633 (+) 759 WP_047476235.1 ABC transporter ATP-binding protein -
  NNG64_RS01990 (NNG64_01990) - 392655..393599 (+) 945 WP_060963605.1 siderophore ABC transporter substrate-binding protein -
  NNG64_RS01995 (NNG64_01995) - 393641..395065 (-) 1425 WP_060963604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34971.26 Da        Isoelectric Point: 9.6741

>NTDB_id=710833 NNG64_RS01975 WP_060963606.1 389991..390944(+) (ceuB) [Bacillus siamensis strain WYJ-E14]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQASTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSVATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNIVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=710833 NNG64_RS01975 WP_060963606.1 389991..390944(+) (ceuB) [Bacillus siamensis strain WYJ-E14]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTATTGGCGTGTACTTCTATTTTTATCGGTGTAGAAGACTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAAGTACATTATTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATTA
TTGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGGATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTAAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTGTTCATGAAAATCCTCGAGAGAATCAAGTTTAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGTTCAGTCGCCACGTTTATCGCGTATAAATACGATCTGATC
CAAAATCTGTCGTCCTGGCTGCAGGGGGATTTCTCATTGGTCGTCAAAGGCCGGTACGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTTATCGCTTCACTTGTGATTCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATCGTGTCGATCTACAAAGGGGACAACCTGAGGAGCAGTCTGCCCCACAC
AGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCTTACGAAATTTCCATCG
GCCTGATGGTCGGTGTGATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.165

99.685

0.53