Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   NNG64_RS01960 Genome accession   NZ_CP101610
Coordinates   387755..387874 (+) Length   39 a.a.
NCBI ID   WP_016937261.1    Uniprot ID   -
Organism   Bacillus siamensis strain WYJ-E14     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 382755..392874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NNG64_RS01945 (NNG64_01945) - 384366..385049 (+) 684 WP_060963609.1 response regulator transcription factor -
  NNG64_RS01950 (NNG64_01950) - 385036..386469 (+) 1434 WP_162492439.1 HAMP domain-containing sensor histidine kinase -
  NNG64_RS01955 (NNG64_01955) rapC 386623..387771 (+) 1149 WP_045926250.1 tetratricopeptide repeat protein Regulator
  NNG64_RS01960 (NNG64_01960) phrC 387755..387874 (+) 120 WP_016937261.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NNG64_RS01965 (NNG64_01965) - 388017..388115 (-) 99 WP_016937260.1 YjcZ family sporulation protein -
  NNG64_RS01970 (NNG64_01970) - 388211..389575 (-) 1365 WP_060963607.1 aspartate kinase -
  NNG64_RS01975 (NNG64_01975) ceuB 389991..390944 (+) 954 WP_060963606.1 ABC transporter permease Machinery gene
  NNG64_RS01980 (NNG64_01980) - 390934..391881 (+) 948 WP_045926247.1 iron chelate uptake ABC transporter family permease subunit -
  NNG64_RS01985 (NNG64_01985) - 391875..392633 (+) 759 WP_047476235.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4214.93 Da        Isoelectric Point: 8.0284

>NTDB_id=710832 NNG64_RS01960 WP_016937261.1 387755..387874(+) (phrC) [Bacillus siamensis strain WYJ-E14]
MKLKSKWFVICLAAAAIFTVAGAGQTDQADFHVTERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=710832 NNG64_RS01960 WP_016937261.1 387755..387874(+) (phrC) [Bacillus siamensis strain WYJ-E14]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTTGCAGGTGCAGGCCAGACAGA
TCAGGCTGACTTCCATGTAACTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

77.5

100

0.795