Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | NNG64_RS00580 | Genome accession | NZ_CP101610 |
| Coordinates | 104303..106738 (+) | Length | 811 a.a. |
| NCBI ID | WP_060963753.1 | Uniprot ID | A0AAI8HS63 |
| Organism | Bacillus siamensis strain WYJ-E14 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 99303..111738
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NNG64_RS00565 (NNG64_00565) | ctsR | 102180..102644 (+) | 465 | WP_016935919.1 | transcriptional regulator CtsR | - |
| NNG64_RS00570 (NNG64_00570) | - | 102658..103215 (+) | 558 | WP_016935918.1 | UvrB/UvrC motif-containing protein | - |
| NNG64_RS00575 (NNG64_00575) | - | 103215..104306 (+) | 1092 | WP_060963754.1 | protein arginine kinase | - |
| NNG64_RS00580 (NNG64_00580) | clpC | 104303..106738 (+) | 2436 | WP_060963753.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| NNG64_RS00585 (NNG64_00585) | radA | 106832..108211 (+) | 1380 | WP_060963752.1 | DNA repair protein RadA | Machinery gene |
| NNG64_RS00590 (NNG64_00590) | disA | 108215..109297 (+) | 1083 | WP_003156401.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| NNG64_RS00595 (NNG64_00595) | - | 109411..110511 (+) | 1101 | WP_016935914.1 | PIN/TRAM domain-containing protein | - |
| NNG64_RS00600 (NNG64_00600) | ispD | 110525..111223 (+) | 699 | WP_060965083.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| NNG64_RS00605 (NNG64_00605) | ispF | 111216..111692 (+) | 477 | WP_016935912.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90192.63 Da Isoelectric Point: 5.7558
>NTDB_id=710825 NNG64_RS00580 WP_060963753.1 104303..106738(+) (clpC) [Bacillus siamensis strain WYJ-E14]
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSGAGTNSSAN
TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDVAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSGAGTNSSAN
TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDVAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
Nucleotide
Download Length: 2436 bp
>NTDB_id=710825 NNG64_RS00580 WP_060963753.1 104303..106738(+) (clpC) [Bacillus siamensis strain WYJ-E14]
ATGATGTTTGGAAGATTTACAGAGCGGGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCTTTAGAAGCGCTTG
GCCTCAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATTGGCCGAGGACAGGAAAGCACCACCTCTGTCCCTCAT
TACACGCCTCGAGCCAAAAAGGTAATAGAACTATCAATGGATGAAGCCAGAAAGCTCGGTCATTCTTATGTAGGAACAGA
GCACATACTTCTTGGGCTGATTCGTGAAGGTGAGGGAGTCGCCGCGAGAGTTCTGAATAATCTGGGTGTCAGTCTCAATA
AGGCGAGACAGCAGGTTCTGCAGCTTCTCGGAAGCAATGAGACAGGGACATCCGGAGCAGGGACAAATAGCAGCGCAAAC
ACGCCGACGCTTGACAGTCTGGCGCGTGATTTAACCGCGATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAATCCCGTTCTGATTGGGGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGTCTCGCACAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGCGATAAACGCGTA
ATGACATTAGACATGGGAACGGTTGTAGCCGGCACGAAATACCGCGGAGAATTTGAAGACCGTTTGAAAAAAGTAATGGA
TGAAATACGTCAGGCGGGCAATATCATTTTATTCATTGACGAATTGCACACACTGATCGGAGCTGGAGGAGCAGAAGGTG
CGATTGACGCGTCGAATATTTTAAAACCTTCACTCGCTCGCGGAGAGCTTCAGTGCATTGGTGCGACAACGCTTGATGAA
TACCGCAAATATATCGAAAAAGACGCAGCTCTGGAGCGCCGCTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA
AAGCATTCAGATCTTAAAAGGGCTTCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACCGATGAAGCGATCGAAG
CGGCGGTTAAATTGTCTGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCTGGT
TCAAAAGTACGTCTCCGTTCCTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAAAGCCAGGAGTTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCTTGAGAGAACAGG
TGGAAGATACGAAAAAAACGTGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCAATGGTG
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGTATTCT
GCACTCCCGCGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCGAAGGCTGTCAGACGTGCAAGAGCCGGTTTGAAGG
ATCCGAAACGTCCGATCGGTTCATTCATCTTCTTAGGCCCTACAGGCGTAGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCTATTTTCGGTGATGAAGAAGCGATGATCAGAGTGGATATGTCCGAATATATGGAGAAACATTCGACTTCACGTCT
TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGCCAGCTGACGGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTTCTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAGGGACGCACTGTTGATTTCCGCAATACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAATTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGACCAATTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACGGATGT
TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGACTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAGCTTCTCAGAGGCAATATTGATAAAGGCCAGCACATCGTTCTTGACGTTGAAGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
ATGATGTTTGGAAGATTTACAGAGCGGGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCTTTAGAAGCGCTTG
GCCTCAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATTGGCCGAGGACAGGAAAGCACCACCTCTGTCCCTCAT
TACACGCCTCGAGCCAAAAAGGTAATAGAACTATCAATGGATGAAGCCAGAAAGCTCGGTCATTCTTATGTAGGAACAGA
GCACATACTTCTTGGGCTGATTCGTGAAGGTGAGGGAGTCGCCGCGAGAGTTCTGAATAATCTGGGTGTCAGTCTCAATA
AGGCGAGACAGCAGGTTCTGCAGCTTCTCGGAAGCAATGAGACAGGGACATCCGGAGCAGGGACAAATAGCAGCGCAAAC
ACGCCGACGCTTGACAGTCTGGCGCGTGATTTAACCGCGATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAATCCCGTTCTGATTGGGGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGTCTCGCACAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGCGATAAACGCGTA
ATGACATTAGACATGGGAACGGTTGTAGCCGGCACGAAATACCGCGGAGAATTTGAAGACCGTTTGAAAAAAGTAATGGA
TGAAATACGTCAGGCGGGCAATATCATTTTATTCATTGACGAATTGCACACACTGATCGGAGCTGGAGGAGCAGAAGGTG
CGATTGACGCGTCGAATATTTTAAAACCTTCACTCGCTCGCGGAGAGCTTCAGTGCATTGGTGCGACAACGCTTGATGAA
TACCGCAAATATATCGAAAAAGACGCAGCTCTGGAGCGCCGCTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA
AAGCATTCAGATCTTAAAAGGGCTTCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACCGATGAAGCGATCGAAG
CGGCGGTTAAATTGTCTGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCTGGT
TCAAAAGTACGTCTCCGTTCCTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAAAGCCAGGAGTTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCTTGAGAGAACAGG
TGGAAGATACGAAAAAAACGTGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCAATGGTG
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGTATTCT
GCACTCCCGCGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCGAAGGCTGTCAGACGTGCAAGAGCCGGTTTGAAGG
ATCCGAAACGTCCGATCGGTTCATTCATCTTCTTAGGCCCTACAGGCGTAGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCTATTTTCGGTGATGAAGAAGCGATGATCAGAGTGGATATGTCCGAATATATGGAGAAACATTCGACTTCACGTCT
TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGCCAGCTGACGGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTTCTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAGGGACGCACTGTTGATTTCCGCAATACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAATTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGACCAATTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACGGATGT
TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGACTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAGCTTCTCAGAGGCAATATTGATAAAGGCCAGCACATCGTTCTTGACGTTGAAGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.301 |
100 |
0.963 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.689 |
99.014 |
0.492 |
| clpC | Streptococcus thermophilus LMD-9 |
46.359 |
100 |
0.471 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.117 |
100 |
0.469 |
| clpC | Streptococcus mutans UA159 |
44.511 |
100 |
0.455 |
| clpC | Streptococcus pneumoniae D39 |
45.264 |
100 |
0.454 |
| clpC | Streptococcus pneumoniae Rx1 |
45.264 |
100 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.141 |
100 |
0.453 |
| clpE | Streptococcus mutans UA159 |
53.929 |
80.025 |
0.432 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.568 |
81.628 |
0.429 |
| clpE | Streptococcus pneumoniae Rx1 |
52.568 |
81.628 |
0.429 |
| clpE | Streptococcus pneumoniae D39 |
52.568 |
81.628 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.568 |
81.628 |
0.429 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.145 |
84.834 |
0.425 |