Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NMH04_RS15360 Genome accession   NZ_CP101609
Coordinates   2945267..2947579 (-) Length   770 a.a.
NCBI ID   WP_041507704.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 47     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2940267..2952579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMH04_RS15320 (NMH04_15260) - 2940673..2941104 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  NMH04_RS15325 (NMH04_15265) - 2941104..2941445 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  NMH04_RS15330 (NMH04_15270) - 2941438..2942916 (+) 1479 WP_019744043.1 Na+/H+ antiporter subunit D -
  NMH04_RS15335 (NMH04_15275) - 2942923..2943402 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  NMH04_RS15340 (NMH04_15280) - 2943402..2943683 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  NMH04_RS15345 (NMH04_15285) mnhG 2943667..2944041 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  NMH04_RS15350 (NMH04_15290) - 2944132..2944521 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  NMH04_RS15355 (NMH04_15295) comA 2944545..2945186 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  NMH04_RS15360 (NMH04_15300) comP 2945267..2947579 (-) 2313 WP_041507704.1 ATP-binding protein Regulator
  NMH04_RS15365 (NMH04_15305) comX 2947633..2947803 (-) 171 WP_074041927.1 competence pheromone ComX -
  NMH04_RS15370 (NMH04_15310) - 2947800..2948714 (-) 915 WP_168948551.1 polyprenyl synthetase family protein -
  NMH04_RS15375 (NMH04_15315) degQ 2948866..2949006 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NMH04_RS15380 (NMH04_15320) - 2949512..2949865 (+) 354 WP_017367963.1 hypothetical protein -
  NMH04_RS15385 (NMH04_15325) - 2949902..2951128 (-) 1227 WP_035701209.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89568.16 Da        Isoelectric Point: 7.3068

>NTDB_id=710808 NMH04_RS15360 WP_041507704.1 2945267..2947579(-) (comP) [Bacillus altitudinis strain 47]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGESANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEVQRKSAFLLVLFLLTICIGY
LSAGTSGIGDRFSHYVITFCLSSVFIFYIHFIYQYFKEFDLHITTRKTIYILYSLPITNLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMQKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFIAITPTILVVVTFYILQKPEDLKYTLKLAFITYTLMLAVFYFKEILDFRFRLKRFSEKY
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKANGEMIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDD
GVGFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=710808 NMH04_RS15360 WP_041507704.1 2945267..2947579(-) (comP) [Bacillus altitudinis strain 47]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTTGCGGAGAACAAGAATGGTCAAGCAGAAGTTGTCAAAGTCGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGAGAATCTGCTAACAATAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATATGTTTATTTTGTATCTTCTTTA
TCATTCGTATTAACAAAGAGGTCCAACGAAAATCAGCATTTCTTTTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCGGGTATTGGTGATAGATTTAGCCATTATGTCATCACATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCGAAAAACAATTTATATTTTATATA
GTCTTCCTATAACTAATCTAGTAATAGAGCTGTTTGTTCCAATTGATTCGGCGATAGCCAGATACATGCCGAGTTTAAAT
CTTTTATTCTTTTTTGCTTCTATTATCATGTCATTCAAAGTCATTATTAATGGAATGCAGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATTAATATCATAGCATTTTGTCCGTTTATATTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTTGTAGATCCCTTTTTCTTAACTTCTTTTGTATTGCTCATTCCTTTTTCACTCGTGTATCAA
TTCATGACGAACAAACTTTACAATATGGATTTCTTGATTAGTAGACTTAAATACTATGGATTTATTGCTATTACACCGAC
CATTTTAGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTAAAGTACACACTGAAGCTCGCATTCATCACAT
ATACACTCATGTTGGCTGTTTTCTATTTTAAAGAAATTTTAGATTTCCGTTTTCGTTTGAAACGTTTTTCAGAGAAGTAT
AATTACCAAGACAGCGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTACTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTCGTTGTGAATAAAGCCTTTGTGCTAGAGGTGAAGGCTAATGGAGAAATGATTGAAATTG
ATGAATCAACAAATGATAGTAAGTTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGGAAAATC
ATCGAGCTTGATAAAGGGTTTATGATGAAAATTGGAGAGCGGGGCGGTCACTCGTTTATGATTTGCTGCTTATCCAATAT
ACAGACGCCGAAATTGACCCGCGATGAAATCTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATCGAAGAACTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCAGCCTGGCTGAAGAAAGTC
ATGTTCGCCATGGAAGAGAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACT
GAAGAGACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGCCATGAACTTCGGCCGCAGCTCCTCTATGATTTG
GGGTTAGTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCG
CTTTGATAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTATCGGATTGTGCAGGAGCTGTTATCCAATGCGT
TGAAGCATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGAT
GGAGTCGGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGC
TCTAAATGGAAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.645

100

0.49