Detailed information NTG0710468

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: NNL33_RS22360
• Genome accession: NZ_CP101533
• Coordinates: 4498475..4499275 (+)
• Length: 266 a.a.
• NCBI ID: WP_002888947.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain FZKP4523
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4493475..4504275

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NNL33_RS22325	gspH	4493631..4494146 (+)	516	WP_004151939.1	type II secretion system minor pseudopilin GspH	-
NNL33_RS22330	gspI	4494143..4494508 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
NNL33_RS22335	gspJ	4494505..4495101 (+)	597	WP_004151940.1	type II secretion system minor pseudopilin GspJ	-
NNL33_RS22340	gspK	4495098..4496084 (+)	987	WP_004151941.1	type II secretion system minor pseudopilin GspK	-
NNL33_RS22345	gspL	4496071..4497264 (+)	1194	WP_004151942.1	type II secretion system protein GspL	-
NNL33_RS22350	-	4497257..4497742 (+)	486	WP_004151943.1	type II secretion system protein M	-
NNL33_RS22355	-	4497732..4498478 (+)	747	WP_004145897.1	type II secretion system protein N	-
NNL33_RS22360	pilD	4498475..4499275 (+)	801	WP_002888947.1	A24 family peptidase	Machinery gene
NNL33_RS22365	hrpB	4499323..4501752 (-)	2430	WP_004151944.1	ATP-dependent helicase HrpB	-
NNL33_RS22370	thpR	4501825..4502361 (+)	537	WP_004145901.1	RNA 2',3'-cyclic phosphodiesterase	-
NNL33_RS22375	sfsA	4502361..4503077 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
NNL33_RS22380	dksA	4503240..4503695 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29419.04 Da
• Isoelectric Point: 8.8894

>NTDB_id=710468 NNL33_RS22360 WP_002888947.1 4498475..4499275(+) (pilD) [Klebsiella pneumoniae strain FZKP4523]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGSIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=710468 NNL33_RS22360 WP_002888947.1 4498475..4499275(+) (pilD) [Klebsiella pneumoniae strain FZKP4523]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTACTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTAGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGA
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTGCTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGAGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425