Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NKW85_RS06520 | Genome accession | NZ_CP101498 |
| Coordinates | 1382471..1383445 (+) | Length | 324 a.a. |
| NCBI ID | WP_023015152.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain QB7 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1377471..1388445
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NKW85_RS06490 (NKW85_06480) | - | 1378280..1378822 (+) | 543 | WP_023015149.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| NKW85_RS06495 (NKW85_06485) | - | 1378835..1380292 (+) | 1458 | WP_023015150.1 | rhomboid family intramembrane serine protease | - |
| NKW85_RS06500 (NKW85_06490) | - | 1380276..1380476 (+) | 201 | WP_002481044.1 | YqgQ family protein | - |
| NKW85_RS06505 (NKW85_06495) | - | 1380476..1381462 (+) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| NKW85_RS06510 (NKW85_06500) | - | 1381462..1381791 (+) | 330 | WP_002481042.1 | MTH1187 family thiamine-binding protein | - |
| NKW85_RS06515 (NKW85_06505) | - | 1381791..1382414 (+) | 624 | WP_057510470.1 | MBL fold metallo-hydrolase | - |
| NKW85_RS06520 (NKW85_06510) | comGA | 1382471..1383445 (+) | 975 | WP_023015152.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NKW85_RS06525 (NKW85_06515) | comGB | 1383417..1384490 (+) | 1074 | WP_023015153.1 | competence type IV pilus assembly protein ComGB | - |
| NKW85_RS06530 (NKW85_06520) | comGC | 1384508..1384837 (+) | 330 | WP_002481038.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NKW85_RS06535 (NKW85_06525) | comGD | 1384840..1385265 (+) | 426 | WP_002481037.1 | competence type IV pilus minor pilin ComGD | - |
| NKW85_RS06540 (NKW85_06530) | comGF | 1385484..1385978 (+) | 495 | WP_002481036.1 | competence type IV pilus minor pilin ComGF | - |
| NKW85_RS06545 (NKW85_06535) | - | 1386143..1386682 (+) | 540 | WP_002481034.1 | shikimate kinase | - |
| NKW85_RS06550 (NKW85_06540) | gcvT | 1386861..1387955 (+) | 1095 | WP_353421997.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36953.97 Da Isoelectric Point: 7.7580
>NTDB_id=710243 NKW85_RS06520 WP_023015152.1 1382471..1383445(+) (comGA) [Staphylococcus simulans strain QB7]
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPVSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPVSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=710243 NKW85_RS06520 WP_023015152.1 1382471..1383445(+) (comGA) [Staphylococcus simulans strain QB7]
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACCTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGGTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACCTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGGTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.681 |
99.691 |
0.605 |
| comGA | Staphylococcus aureus N315 |
60.681 |
99.691 |
0.605 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
38.245 |
98.457 |
0.377 |