Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   PJV85_RS07115 Genome accession   NZ_CP116457
Coordinates   1438875..1439909 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain 1095     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1433875..1444909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJV85_RS07080 (PJV85_07080) - 1434651..1434953 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  PJV85_RS07085 (PJV85_07085) rnpM 1434946..1435242 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  PJV85_RS07090 (PJV85_07090) nusA 1435258..1436415 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  PJV85_RS07095 (PJV85_07095) rimP 1436590..1437126 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  PJV85_RS07105 (PJV85_07105) trmB 1437385..1438020 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PJV85_RS07110 (PJV85_07110) ccrZ 1438020..1438811 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  PJV85_RS07115 (PJV85_07115) pptB 1438875..1439909 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  PJV85_RS07120 (PJV85_07120) pptA 1439912..1440637 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  PJV85_RS07125 (PJV85_07125) - 1440709..1441128 (+) 420 WP_002983376.1 HIT family protein -
  PJV85_RS07130 (PJV85_07130) - 1441125..1441481 (+) 357 WP_002988657.1 hypothetical protein -
  PJV85_RS07135 (PJV85_07135) brpA 1441592..1442866 (-) 1275 WP_010922584.1 biofilm formation/cell division transcriptional regulator BrpA -
  PJV85_RS07140 (PJV85_07140) - 1442875..1443399 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  PJV85_RS07145 (PJV85_07145) tsaE 1443374..1443835 (-) 462 WP_136278107.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=710221 PJV85_RS07115 WP_010922583.1 1438875..1439909(-) (pptB) [Streptococcus pyogenes strain 1095]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=710221 PJV85_RS07115 WP_010922583.1 1438875..1439909(-) (pptB) [Streptococcus pyogenes strain 1095]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGCCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCCCTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427