Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NM232_RS16490 Genome accession   NZ_CP101399
Coordinates   3087794..3087991 (+) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain HM-7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3082794..3092991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NM232_RS16460 - 3083193..3083372 (+) 180 WP_008348517.1 YjzC family protein -
  NM232_RS16465 - 3083542..3084807 (+) 1266 WP_007499050.1 MFS transporter -
  NM232_RS16470 - 3084928..3085122 (-) 195 WP_008348514.1 YjzD family protein -
  NM232_RS16475 - 3085335..3086075 (+) 741 WP_007499048.1 hypothetical protein -
  NM232_RS16480 - 3086151..3086726 (+) 576 WP_058214005.1 hypothetical protein -
  NM232_RS16485 med 3086817..3087782 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  NM232_RS16490 comZ 3087794..3087991 (+) 198 WP_008348507.1 ComZ family protein Regulator
  NM232_RS16495 - 3088002..3088235 (-) 234 WP_008348506.1 hypothetical protein -
  NM232_RS16500 - 3088405..3089343 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  NM232_RS16505 fabF 3089365..3090606 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  NM232_RS16510 - 3090684..3091478 (+) 795 WP_035700281.1 DUF2268 domain-containing protein -
  NM232_RS16515 - 3091649..3092629 (+) 981 WP_035392443.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=710009 NM232_RS16490 WP_008348507.1 3087794..3087991(+) (comZ) [Bacillus altitudinis strain HM-7]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=710009 NM232_RS16490 WP_008348507.1 3087794..3087991(+) (comZ) [Bacillus altitudinis strain HM-7]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662