Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NM232_RS16485 Genome accession   NZ_CP101399
Coordinates   3086817..3087782 (+) Length   321 a.a.
NCBI ID   WP_008348509.1    Uniprot ID   A0A9X0FWP2
Organism   Bacillus altitudinis strain HM-7     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3081817..3092782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NM232_RS16455 argF 3082139..3083089 (+) 951 WP_008348520.1 ornithine carbamoyltransferase -
  NM232_RS16460 - 3083193..3083372 (+) 180 WP_008348517.1 YjzC family protein -
  NM232_RS16465 - 3083542..3084807 (+) 1266 WP_007499050.1 MFS transporter -
  NM232_RS16470 - 3084928..3085122 (-) 195 WP_008348514.1 YjzD family protein -
  NM232_RS16475 - 3085335..3086075 (+) 741 WP_007499048.1 hypothetical protein -
  NM232_RS16480 - 3086151..3086726 (+) 576 WP_058214005.1 hypothetical protein -
  NM232_RS16485 med 3086817..3087782 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  NM232_RS16490 comZ 3087794..3087991 (+) 198 WP_008348507.1 ComZ family protein Regulator
  NM232_RS16495 - 3088002..3088235 (-) 234 WP_008348506.1 hypothetical protein -
  NM232_RS16500 - 3088405..3089343 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  NM232_RS16505 fabF 3089365..3090606 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  NM232_RS16510 - 3090684..3091478 (+) 795 WP_035700281.1 DUF2268 domain-containing protein -
  NM232_RS16515 - 3091649..3092629 (+) 981 WP_035392443.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35902.89 Da        Isoelectric Point: 5.9297

>NTDB_id=710008 NM232_RS16485 WP_008348509.1 3086817..3087782(+) (med) [Bacillus altitudinis strain HM-7]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKNDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=710008 NM232_RS16485 WP_008348509.1 3086817..3087782(+) (med) [Bacillus altitudinis strain HM-7]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAATGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAAACGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACAGTCCAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAACTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632