Detailed information NTG0070992

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: H7680_RS10275
• Genome accession: NZ_AP023394
• Coordinates: 2092982..2094088 (+)
• Length: 368 a.a.
• NCBI ID: WP_014612659.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain 159
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2087982..2099088

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7680_RS10250 (SDSE159_20140)	pgsA	2088092..2088634 (-)	543	WP_003062173.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
H7680_RS10255 (SDSE159_20150)	-	2088648..2089679 (-)	1032	WP_003061371.1	helix-turn-helix domain-containing protein	-
H7680_RS10260 (SDSE159_20160)	-	2089729..2091012 (-)	1284	WP_003055116.1	pitrilysin family protein	-
H7680_RS10265 (SDSE159_20170)	-	2091014..2092258 (-)	1245	WP_003055123.1	pitrilysin family protein	-
H7680_RS10270 (SDSE159_20180)	yaaA	2092567..2092980 (+)	414	WP_003055132.1	S4 domain-containing protein YaaA	-
H7680_RS10275 (SDSE159_20190)	recF	2092982..2094088 (+)	1107	WP_014612659.1	DNA replication/repair protein RecF	Machinery gene
H7680_RS10280 (SDSE159_20200)	-	2094145..2095008 (-)	864	WP_003055126.1	GRP family sugar transporter	-
H7680_RS10285 (SDSE159_20210)	guaB	2095220..2096701 (-)	1482	WP_003060436.1	IMP dehydrogenase	-
H7680_RS10290 (SDSE159_20220)	trpS	2096918..2097940 (-)	1023	WP_003055141.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41909.86 Da
• Isoelectric Point: 8.9556

>NTDB_id=70992 H7680_RS10275 WP_014612659.1 2092982..2094088(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRVSGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGTRVMEHRIDFINALEKEANTHHQAISNGLENLSLSYQSSVVFDKRTNIYQQFLH
QLKKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTIQVDSEIH

Nucleotide

• Length: 1107 bp

>NTDB_id=70992 H7680_RS10275 WP_014612659.1 2092982..2094088(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCCTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTGTTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGCGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGGGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAACCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAGCAAATTGATGCGGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAAC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCATTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAATCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAGAACTAATATTTACCAACAATTTTTACAC
CAACTTAAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTGGGCCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGAATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCATTCAAGTTGATTCTGAAATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.912	98.913	0.622
recF	Bacillus subtilis subsp. subtilis str. 168	45.455	100	0.462