Detailed information NTG0709841

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: PFZ59_RS02930
• Genome accession: NZ_CP116393
• Coordinates: 554034..555128 (+)
• Length: 364 a.a.
• NCBI ID: WP_044683087.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SS/UPM/MY/F001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 549034..560128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PFZ59_RS02895 (PFZ59_02895)	-	549405..550043 (-)	639	WP_277697450.1	Rha family transcriptional regulator	-
PFZ59_RS02900 (PFZ59_02900)	-	550054..550749 (-)	696	WP_277697451.1	Rha family transcriptional regulator	-
PFZ59_RS02905 (PFZ59_02905)	-	550767..550967 (-)	201	WP_277697452.1	helix-turn-helix domain-containing protein	-
PFZ59_RS02910 (PFZ59_02910)	-	551173..551679 (+)	507	WP_277697765.1	helix-turn-helix domain-containing protein	-
PFZ59_RS02915 (PFZ59_02915)	-	551905..552009 (-)	105	WP_347176376.1	type I toxin-antitoxin system Fst family toxin	-
PFZ59_RS02920 (PFZ59_02920)	-	552344..553510 (+)	1167	WP_277697453.1	site-specific integrase	-
PFZ59_RS02925 (PFZ59_02925)	yaaA	553648..554031 (+)	384	WP_063077020.1	S4 domain-containing protein YaaA	-
PFZ59_RS02930 (PFZ59_02930)	recF	554034..555128 (+)	1095	WP_044683087.1	DNA replication/repair protein RecF	Machinery gene
PFZ59_RS02935 (PFZ59_02935)	guaB	555199..556680 (-)	1482	WP_208581762.1	IMP dehydrogenase	-
PFZ59_RS02940 (PFZ59_02940)	trpS	556912..557937 (-)	1026	WP_014736602.1	tryptophan--tRNA ligase	-
PFZ59_RS02945 (PFZ59_02945)	-	558292..559164 (+)	873	WP_277697454.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42210.35 Da
• Isoelectric Point: 7.4360

>NTDB_id=709841 PFZ59_RS02930 WP_044683087.1 554034..555128(+) (recF) [Streptococcus suis strain SS/UPM/MY/F001]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYALALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQDISDKREELTIEYQSSIKFTTSVNLIDIFLT
ELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=709841 PFZ59_RS02930 WP_044683087.1 554034..555128(+) (recF) [Streptococcus suis strain SS/UPM/MY/F001]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGCTTTAGCTTTAACACGAAGCCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCACTTGACATTCACTTGACAGATAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCAAAACTTTCTAATTA
CATTGGACATATGAACGTCGTCCTATTTGCTCCAGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTAAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAACCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGATATTTCAGATA
AGAGAGAGGAACTAACTATCGAATATCAATCCTCAATTAAGTTTACTACTTCTGTCAATTTAATTGACATATTCTTGACG
GAATTAGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGTCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAGCTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	69.806	99.176	0.692
recF	Bacillus subtilis subsp. subtilis str. 168	42.703	100	0.434