Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   PIB33_RS20255 Genome accession   NZ_CP116391
Coordinates   3825650..3826024 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain GXD-20     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3820650..3831024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PIB33_RS20230 (PIB33_20230) - 3820814..3820975 (-) 162 WP_003227632.1 hypothetical protein -
  PIB33_RS20235 (PIB33_20235) glpX 3821190..3822155 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  PIB33_RS20240 (PIB33_20240) murAB 3822186..3823475 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  PIB33_RS20245 (PIB33_20245) fsa 3823854..3824492 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  PIB33_RS20250 (PIB33_20250) fbaA 3824612..3825469 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  PIB33_RS20255 (PIB33_20255) letA 3825650..3826024 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  PIB33_RS20260 (PIB33_20260) ywjG 3826190..3826711 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  PIB33_RS20265 (PIB33_20265) pyrG 3826793..3828400 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  PIB33_RS20270 (PIB33_20270) rpoE 3828642..3829163 (-) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  PIB33_RS20275 (PIB33_20275) acdA 3829346..3830485 (-) 1140 WP_032722686.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=709798 PIB33_RS20255 WP_003227621.1 3825650..3826024(-) (letA) [Bacillus subtilis strain GXD-20]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=709798 PIB33_RS20255 WP_003227621.1 3825650..3826024(-) (letA) [Bacillus subtilis strain GXD-20]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363