Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   H7680_RS02860 Genome accession   NZ_AP023394
Coordinates   542798..543607 (+) Length   269 a.a.
NCBI ID   WP_003057211.1    Uniprot ID   A0ABU0A532
Organism   Streptococcus dysgalactiae subsp. equisimilis strain 159     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 537798..548607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7680_RS02835 (SDSE159_05160) - 538171..538872 (-) 702 WP_003057191.1 amino acid ABC transporter permease -
  H7680_RS02840 (SDSE159_05170) - 538886..539686 (-) 801 WP_003057243.1 transporter substrate-binding domain-containing protein -
  H7680_RS02845 (SDSE159_05180) - 539686..540480 (-) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  H7680_RS02850 (SDSE159_05190) yycF 540739..541449 (+) 711 WP_150336165.1 response regulator YycF -
  H7680_RS02855 (SDSE159_05200) vicK 541442..542794 (+) 1353 WP_014612101.1 cell wall metabolism sensor histidine kinase VicK Regulator
  H7680_RS02860 (SDSE159_05210) vicX 542798..543607 (+) 810 WP_003057211.1 MBL fold metallo-hydrolase Regulator
  H7680_RS02865 (SDSE159_05220) rnc 544365..545057 (+) 693 WP_003057240.1 ribonuclease III -
  H7680_RS02870 (SDSE159_05230) smc 545058..548603 (+) 3546 WP_003057203.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30191.40 Da        Isoelectric Point: 6.0739

>NTDB_id=70928 H7680_RS02860 WP_003057211.1 542798..543607(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQFMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=70928 H7680_RS02860 WP_003057211.1 542798..543607(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTTATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment