Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NL113_RS18870 Genome accession   NZ_CP101130
Coordinates   3762194..3762994 (+) Length   266 a.a.
NCBI ID   WP_006637490.1    Uniprot ID   A0A7Y8V4C6
Organism   Bacillus sp. KRF7     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3757194..3767994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NL113_RS18850 - 3757246..3758091 (+) 846 WP_006637494.1 TlyA family RNA methyltransferase -
  NL113_RS18855 argR 3758198..3758647 (+) 450 WP_006637493.1 transcriptional regulator ArgR -
  NL113_RS18860 recN 3758677..3760407 (+) 1731 WP_006637492.1 DNA repair protein RecN Machinery gene
  NL113_RS18865 spoIVB 3760588..3761904 (+) 1317 WP_051056677.1 SpoIVB peptidase -
  NL113_RS18870 spo0A 3762194..3762994 (+) 801 WP_006637490.1 sporulation transcription factor Spo0A Regulator
  NL113_RS18875 - 3763078..3763389 (-) 312 WP_006637489.1 hypothetical protein -
  NL113_RS18880 - 3763401..3764846 (-) 1446 WP_176463742.1 lipase -
  NL113_RS18885 - 3764891..3765235 (+) 345 WP_006637487.1 DUF1433 domain-containing protein -
  NL113_RS18890 - 3765706..3766719 (+) 1014 WP_006637486.1 S66 peptidase family protein -
  NL113_RS18895 - 3766950..3767147 (+) 198 WP_006637485.1 hypothetical protein -
  NL113_RS18900 - 3767175..3767498 (+) 324 WP_006637484.1 membrane lipoprotein lipid attachment site-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29597.14 Da        Isoelectric Point: 6.6109

>NTDB_id=708993 NL113_RS18870 WP_006637490.1 3762194..3762994(+) (spo0A) [Bacillus sp. KRF7]
MEKIKVCVADDNRELVGLLSEYIEGQNDMEVIGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQMTHRAPSAQNSILRPQPESPKKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=708993 NL113_RS18870 WP_006637490.1 3762194..3762994(+) (spo0A) [Bacillus sp. KRF7]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGTCAAAA
TGACATGGAAGTGATCGGCGTGGCTTACAATGGCCAAGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCTGACGTTCTCG
TGCTGGACATTATTATGCCCCATCTCGACGGTTTGGCCGTTTTGGAGAGACTGCGGGAATCCCAGCTCAAAAAACAGCCG
AACGTCATCATGCTGACAGCTTTCGGCCAGGAAGACGTGACGAAAAAAGCCGTGGATTTGGGCGCATCTTATTTTATTCT
AAAACCATTCGATATGGAGAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAACGGGTCACAAATGACACACCGCGCCC
CTTCAGCCCAAAACAGCATTCTGCGTCCGCAGCCTGAATCACCAAAGAAAAACCTGGACGCCAGCATCACGAGCATCATC
CACGAAATCGGAGTTCCCGCCCATATCAAAGGATATCTGTACTTGAGAGAAGCCATCTCGATGGTGTATAACGATATTGA
ACTGCTCGGCAGCATTACAAAAGTGCTGTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGAGTCGAACGGG
CGATCCGCCACGCCATCGAAGTCGCTTGGAGCAGAGGCAACATCGACTCCATCTCATCGCTGTTCGGCTACACCGTCAGC
ATGTCAAAAGCAAAGCCGACGAATTCTGAATTCATCGCGATGGTGGCTGATAAGCTGCGGCTTGAGCATAAGGCTTCATA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8V4C6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.884

100

0.932