Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   NL113_RS14980 Genome accession   NZ_CP101130
Coordinates   3032098..3034410 (+) Length   770 a.a.
NCBI ID   WP_006638894.1    Uniprot ID   M5P0P3
Organism   Bacillus sp. KRF7     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3027098..3039410
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NL113_RS14955 - 3028600..3029817 (+) 1218 WP_006638898.1 EAL and HDOD domain-containing protein -
  NL113_RS14960 - 3029864..3030205 (-) 342 WP_224254434.1 hypothetical protein -
  NL113_RS14965 degQ 3030698..3030838 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  NL113_RS14970 - 3031027..3031926 (+) 900 WP_006638896.1 polyprenyl synthetase family protein -
  NL113_RS14975 comX 3031910..3032083 (+) 174 WP_006638895.1 competence pheromone ComX -
  NL113_RS14980 comP 3032098..3034410 (+) 2313 WP_006638894.1 ATP-binding protein Regulator
  NL113_RS14985 comA 3034492..3035130 (+) 639 WP_006638893.1 response regulator transcription factor Regulator
  NL113_RS14990 - 3035149..3035541 (+) 393 WP_006638892.1 hotdog fold thioesterase -
  NL113_RS14995 mnhG 3035581..3035955 (-) 375 WP_006638891.1 monovalent cation/H(+) antiporter subunit G -
  NL113_RS15000 - 3035939..3036223 (-) 285 WP_006638890.1 Na(+)/H(+) antiporter subunit F1 -
  NL113_RS15005 - 3036223..3036699 (-) 477 WP_006638889.1 Na+/H+ antiporter subunit E -
  NL113_RS15010 - 3036705..3038183 (-) 1479 WP_006638888.1 Na+/H+ antiporter subunit D -
  NL113_RS15015 - 3038176..3038517 (-) 342 WP_006638887.1 Na(+)/H(+) antiporter subunit C -
  NL113_RS15020 - 3038517..3038948 (-) 432 WP_006638886.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 770 a.a.        Molecular weight: 88919.75 Da        Isoelectric Point: 8.3423

>NTDB_id=708973 NL113_RS14980 WP_006638894.1 3032098..3034410(+) (comP) [Bacillus sp. KRF7]
MKSIYNKLSVILILWSFIFVIYVCYITINNNLVGLKVTNINEHSLKVVEVEKHSLAGTYAELKKGDIIHKINGGPVPVKK
DKEYTLSNVLTLTIERDGKIYENDSLDYLNLVSYDSFFIFIIPIIFYFLSLVCAFFILKANKSKNLFSALLLIIFLLVVS
IAYVSAGTVARGDKLSRFVNILTFLSVPTSYLHFIYQYFKELGKKLFSRKVFFLYLIPFINVLIEIGSYLSDFGNDYVRS
INLLSFFVAAIIVFTLIVYSLVKYKYSQQSYLLKILMLTNFIALVPFLFFYVLPMLFLGDYIFSAIVVSPFLLLIPLSLV
YQFMSNKIYDIEFLIGRLKYYSFLAIIPTSIIITILGLLKHQEGEFYTIKITVFTYLIMLGVFYLKEIIDFRFRLKRFSE
KFNYQDSIFKFTQMIRTFTSLNQVLLELKQAILDVLTVSQAHVLKVKNDGTISLLEGETEDYPWIPYEKEVSKVIAEIGK
IIEVDRGFLIKIGERGGTSYVMLCLSMLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWLNK
LMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTSQIQQRLINMNEQMSNVIQTTRETCQELRPQLLY
DLGLVKALSKLVAQHQESSSIRIRLNTERFSKVLDLDTQLNLYRIVQELLNNAVKHSKAHEILIMLVCIKEKVVLHYEDD
GVGFDQDKLYQNKTGMGLSGIRERVRALDGNLEIKTAEGKGFRVIIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=708973 NL113_RS14980 WP_006638894.1 3032098..3034410(+) (comP) [Bacillus sp. KRF7]
ATGAAATCGATATATAATAAGCTGTCTGTAATTTTAATTTTGTGGAGCTTTATATTTGTTATATACGTTTGTTACATTAC
CATTAATAATAATTTGGTTGGTTTAAAAGTAACGAACATAAATGAACACAGTCTTAAAGTTGTGGAAGTTGAAAAACATT
CTTTAGCAGGCACTTATGCAGAATTAAAAAAAGGAGATATCATTCATAAAATTAATGGCGGTCCAGTCCCGGTAAAAAAG
GATAAGGAGTATACGCTGTCCAATGTTTTAACCTTAACAATTGAAAGAGACGGCAAAATATATGAGAATGATTCTCTGGA
TTATTTGAATTTAGTCAGCTATGACAGCTTTTTTATATTTATTATTCCAATAATATTTTATTTTTTAAGTTTAGTTTGCG
CATTTTTTATTTTAAAAGCAAATAAATCCAAAAATCTATTTTCAGCACTATTATTGATCATTTTTCTTCTTGTTGTTTCT
ATAGCATATGTTAGTGCAGGAACAGTTGCGAGAGGGGATAAGTTAAGCCGGTTTGTTAATATACTTACTTTTTTAAGTGT
TCCAACCAGCTATTTGCATTTTATTTATCAATATTTTAAAGAACTAGGAAAGAAATTATTTAGCAGAAAAGTTTTCTTTC
TATATTTAATTCCGTTTATAAATGTTCTAATAGAAATAGGGTCGTATTTGAGCGATTTTGGAAACGATTATGTTAGAAGC
ATAAATTTATTGTCATTTTTCGTTGCAGCAATTATTGTATTTACATTAATTGTCTATTCTTTAGTTAAATACAAGTATTC
TCAACAATCTTACTTATTGAAGATTCTAATGTTGACAAATTTTATTGCATTGGTGCCGTTTTTATTTTTTTATGTACTTC
CTATGCTATTTTTAGGTGATTATATTTTTTCAGCAATTGTAGTGTCGCCGTTCCTTTTACTTATTCCGCTTTCCCTGGTT
TATCAATTTATGTCAAATAAGATTTATGATATTGAATTTCTTATTGGTCGGCTTAAATATTATAGCTTTTTAGCTATCAT
ACCGACATCAATTATTATCACCATTTTAGGCTTACTGAAACATCAAGAAGGAGAATTTTATACAATAAAGATCACTGTAT
TCACTTATCTTATTATGCTTGGCGTCTTTTATTTAAAAGAAATCATCGACTTCCGCTTTCGTTTAAAGAGATTTTCAGAG
AAGTTTAACTATCAAGACAGCATCTTTAAATTTACGCAAATGATCCGGACATTTACGTCTTTGAATCAAGTCCTATTAGA
ATTGAAGCAAGCGATACTGGATGTGCTGACTGTCAGCCAAGCACATGTATTGAAAGTGAAAAACGACGGAACGATTTCTT
TGCTGGAAGGAGAGACGGAAGATTACCCTTGGATTCCATATGAAAAAGAAGTCTCCAAGGTCATCGCCGAAATCGGCAAA
ATCATCGAAGTCGACCGCGGGTTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTCTGTCAAT
GCTAAATACGCCCAGGCTCACCCGCGATGAAATTTCCTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCTTGGAAA
ACGTGTTGAAAATCGGCGAGCTGATGGAGCATCTTGAGAATGTGAAAAAGGAAGGGCCGAATCCGGCTTGGCTGAATAAG
CTGATGTTTGCGATTGAGGAGAAGCAGAGATCTGATTTGGCAAGGGATTTACACGATTCGGTGCTTCAGGATATGATTTC
TTTGAAGCATCAAAGCGAGATGTTTCTTGCCGATTTTGAAAAGGATAAAGTCTGTACCTCTCAAATACAGCAAAGGCTGA
TCAATATGAATGAACAAATGTCAAATGTGATTCAGACGACGAGGGAAACGTGCCAGGAGCTCCGGCCGCAGCTGCTGTAT
GATCTAGGCCTTGTTAAGGCGCTCTCCAAACTGGTGGCGCAGCATCAGGAATCCTCATCGATCCGCATTCGTTTAAACAC
GGAAAGGTTTTCAAAAGTGCTGGATCTTGATACACAGCTGAATTTGTACAGAATCGTGCAGGAGCTGTTGAACAATGCGG
TTAAACATTCAAAGGCGCACGAGATTCTGATTATGCTCGTTTGCATTAAAGAAAAGGTCGTCCTTCATTATGAGGATGAC
GGTGTCGGCTTTGATCAGGACAAGCTTTATCAGAACAAAACAGGCATGGGGCTGTCGGGCATCCGTGAGCGGGTCCGCGC
ATTGGACGGCAATCTTGAAATTAAAACAGCTGAGGGAAAAGGATTCAGGGTCATTATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(681-768)

Histidine kinase (HisKA_3)

(570-639)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M5P0P3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

54.086

100

0.542