Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   NL113_RS14965 Genome accession   NZ_CP101130
Coordinates   3030698..3030838 (+) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   P69890
Organism   Bacillus sp. KRF7     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3025698..3035838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NL113_RS14940 - 3025842..3026243 (+) 402 WP_006638901.1 YueI family protein -
  NL113_RS14945 - 3026381..3026932 (+) 552 WP_006638900.1 cysteine hydrolase family protein -
  NL113_RS14950 - 3027010..3028413 (+) 1404 WP_236834954.1 nicotinate phosphoribosyltransferase -
  NL113_RS14955 - 3028600..3029817 (+) 1218 WP_006638898.1 EAL and HDOD domain-containing protein -
  NL113_RS14960 - 3029864..3030205 (-) 342 WP_224254434.1 hypothetical protein -
  NL113_RS14965 degQ 3030698..3030838 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  NL113_RS14970 - 3031027..3031926 (+) 900 WP_006638896.1 polyprenyl synthetase family protein -
  NL113_RS14975 comX 3031910..3032083 (+) 174 WP_006638895.1 competence pheromone ComX -
  NL113_RS14980 comP 3032098..3034410 (+) 2313 WP_006638894.1 ATP-binding protein Regulator
  NL113_RS14985 comA 3034492..3035130 (+) 639 WP_006638893.1 response regulator transcription factor Regulator
  NL113_RS14990 - 3035149..3035541 (+) 393 WP_006638892.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=708972 NL113_RS14965 WP_003184860.1 3030698..3030838(+) (degQ) [Bacillus sp. KRF7]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=708972 NL113_RS14965 WP_003184860.1 3030698..3030838(+) (degQ) [Bacillus sp. KRF7]
GTGGAAAAGCAACAAATTGAAGAGTTAAAGCAATTACTCTGGCGGCTTGAAAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATCGATCAGTACGACAAGTACACATATTTAAAAACCTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P69890

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652