Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | NL113_RS09595 | Genome accession | NZ_CP101130 |
| Coordinates | 1948308..1950740 (-) | Length | 810 a.a. |
| NCBI ID | WP_006640291.1 | Uniprot ID | - |
| Organism | Bacillus sp. KRF7 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1943308..1955740
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL113_RS09570 | ispF | 1943375..1943851 (-) | 477 | WP_006640296.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| NL113_RS09575 | ispD | 1943844..1944539 (-) | 696 | WP_006640295.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| NL113_RS09580 | - | 1944555..1945643 (-) | 1089 | WP_006640294.1 | PIN/TRAM domain-containing protein | - |
| NL113_RS09585 | disA | 1945773..1946849 (-) | 1077 | WP_006640293.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| NL113_RS09590 | radA | 1946853..1948232 (-) | 1380 | WP_006640292.1 | DNA repair protein RadA | Machinery gene |
| NL113_RS09595 | clpC | 1948308..1950740 (-) | 2433 | WP_006640291.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| NL113_RS09600 | - | 1950737..1951828 (-) | 1092 | WP_006640290.1 | protein arginine kinase | - |
| NL113_RS09605 | - | 1951828..1952385 (-) | 558 | WP_006640289.1 | UvrB/UvrC motif-containing protein | - |
| NL113_RS09610 | - | 1952400..1952864 (-) | 465 | WP_006640288.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90141.72 Da Isoelectric Point: 5.9765
>NTDB_id=708953 NL113_RS09595 WP_006640291.1 1948308..1950740(-) (clpC) [Bacillus sp. KRF7]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGGASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNITKGQHIVLDVENGE
FVVKTEAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGGASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNITKGQHIVLDVENGE
FVVKTEAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=708953 NL113_RS09595 WP_006640291.1 1948308..1950740(-) (clpC) [Bacillus sp. KRF7]
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCCCTTGCCCAGGAAGAGGCTCTGCGTCTCGGGCATAA
TAATATTGGAACTGAACATATCCTGCTGGGCCTTGTCCGCGAAGGTGAAGGAATCGCGGCAAAAGCGCTGCAGGCGCTGG
GGCTGAGCCCTGATAAAATTCAAAAAGAGGTAGAAAGCCTGATTGGCCGGGGGCAGGAAATGTCCCAGTCGATCCACTAC
ACACCTAGGGCGAAAAAAGTAACAGAACTAGCGATGGATGAAGCGAGAAAGCTCGGCCATTCATATGTCGGAACCGAGCA
CATCCTCCTGGGATTAATACGTGAAGGCGAAGGCGTCGCTGCCAGAGTGCTGAATAATCTGGGCGTCAGCTTAAATAAAG
CAAGACAACAGGTGCTGCAGCTTTTGGGCAGCAATGAAAGCGGAGGAGGCGCCTCAGGTGCTAACAGCAATGCCAACACA
CCTACTTTGGACAGTCTCGCACGTGATTTAACCGCTATTGCTAAAGAAGACAGCCTTGATCCTGTCATCGGACGGAGCAA
AGAGATTCAGCGCGTCATTGAAGTTCTGAGCCGTAGAACGAAAAACAACCCTGTATTAATCGGGGAGCCAGGCGTAGGAA
AAACGGCGATAGCTGAGGGCTTGGCCCAGCAGATTATCAATAATGAAGTACCTGAAATCTTGCGCGACAAGCGGGTTATG
ACGCTTGATATGGGAACTGTCGTCGCAGGTACAAAATACCGCGGGGAGTTTGAAGACCGCCTTAAAAAAGTGATGGATGA
AATCCGCCAGGCGGGAAACATCATCCTGTTTATCGATGAACTTCATACATTAATCGGCGCCGGCGGCGCTGAAGGCGCAA
TCGACGCGTCCAATATTCTGAAACCGTCTCTTGCGCGCGGAGAGCTGCAATGTATCGGGGCCACAACTCTAGACGAATAT
CGTAAATACATTGAAAAAGACGCGGCCCTCGAACGGCGCTTCCAGCCGATTCAGGTTGATCAGCCTTCACCAGAGGAAAG
CATTCAGATTTTGAAAGGCTTGCGTGACCGCTATGAAGCCCATCACCGTGTATCCATTACAGATGAAGCGATCGAAGCGG
CCGTGAAGCTGTCAGACCGTTATATTTCTGACCGTTTCCTGCCTGACAAAGCGATCGATTTAATCGATGAAGCCGGTTCA
AAGGTTCGTCTGCGTTCATTTACAACGCCTCCTAACCTGAAAGAGCTTGAACAAAAACTCGATGAAGTCCGCAAAGAAAA
AGATGCCGCAGTTCAAAGCCAGGAATTTGAAAAAGCAGCGTCTTTGCGTGACACAGAACAGCGTTTGCGCGAACAGGTAG
AGGAAACGAAGAAAACGTGGAAAGAAAAGCAAGGACAAGAAAACTCCGAAGTGACAGTCGATGATATTGCGATGGTCGTA
TCCAGCTGGACCGGAGTGCCGGTTTCAAAAATCGCCCAGACTGAAACAGATAAGCTGCTGAATATGGAAAGCATTCTTCA
TTCACGTGTTATCGGTCAGGATGAAGCGGTTGTCGCCGTTGCGAAAGCTGTAAGGCGCGCTCGTGCGGGTCTAAAAGATC
CGAAGCGTCCGATCGGTTCGTTTATCTTCCTTGGTCCGACAGGTGTAGGTAAGACTGAGCTTGCCCGCGCTCTTGCCGAA
TCGATTTTCGGCGATGAGGAAGCGATGATTCGCATCGATATGTCAGAGTATATGGAGAAGCATTCAACATCACGGCTCGT
CGGTTCTCCTCCGGGATATGTCGGCTATGATGAGGGCGGACAGCTTACTGAAAAAGTAAGAAGAAAACCTTATTCTGTCG
TCCTGCTCGATGAAATTGAAAAAGCCCACCCCGACGTCTTCAATATTCTGCTGCAAGTGCTTGAAGACGGCCGTTTGACC
GATTCAAAAGGACGTACAGTCGACTTTAGAAATACGATCCTGATTATGACGTCAAACGTCGGCGCAAGCGAACTGAGAAG
AAATAAATACGTCGGATTTAACGTACAGGACGAAACGCAGAACTACAAAGATATGAAAGACAAGGTCATGGGCGAATTAA
AACGCGCCTTCAGACCGGAATTCATCAACCGGATTGATGAAATCATCGTTTTCCACTCCTTGGAGAAAAAACATTTGAAA
GACATCGTCTCCCTCATGTCAGACCAATTGACAAAGCGTCTGAAAGAACAGGATCTTTCAATTGAACTGACAGAAGCGGC
CAAAGAAAAAATCGCCGAAGAAGGGGTAGACCTTGAATACGGGGCCCGTCCGCTCAGAAGGGCCATCCAAAAGCATGTCG
AAGACCGGCTGTCTGAAGAGCTCTTGAAGGGCAACATTACAAAAGGACAGCACATCGTGCTCGATGTGGAAAACGGAGAG
TTTGTCGTAAAAACCGAAGCGAAAACGAACTAA
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCCCTTGCCCAGGAAGAGGCTCTGCGTCTCGGGCATAA
TAATATTGGAACTGAACATATCCTGCTGGGCCTTGTCCGCGAAGGTGAAGGAATCGCGGCAAAAGCGCTGCAGGCGCTGG
GGCTGAGCCCTGATAAAATTCAAAAAGAGGTAGAAAGCCTGATTGGCCGGGGGCAGGAAATGTCCCAGTCGATCCACTAC
ACACCTAGGGCGAAAAAAGTAACAGAACTAGCGATGGATGAAGCGAGAAAGCTCGGCCATTCATATGTCGGAACCGAGCA
CATCCTCCTGGGATTAATACGTGAAGGCGAAGGCGTCGCTGCCAGAGTGCTGAATAATCTGGGCGTCAGCTTAAATAAAG
CAAGACAACAGGTGCTGCAGCTTTTGGGCAGCAATGAAAGCGGAGGAGGCGCCTCAGGTGCTAACAGCAATGCCAACACA
CCTACTTTGGACAGTCTCGCACGTGATTTAACCGCTATTGCTAAAGAAGACAGCCTTGATCCTGTCATCGGACGGAGCAA
AGAGATTCAGCGCGTCATTGAAGTTCTGAGCCGTAGAACGAAAAACAACCCTGTATTAATCGGGGAGCCAGGCGTAGGAA
AAACGGCGATAGCTGAGGGCTTGGCCCAGCAGATTATCAATAATGAAGTACCTGAAATCTTGCGCGACAAGCGGGTTATG
ACGCTTGATATGGGAACTGTCGTCGCAGGTACAAAATACCGCGGGGAGTTTGAAGACCGCCTTAAAAAAGTGATGGATGA
AATCCGCCAGGCGGGAAACATCATCCTGTTTATCGATGAACTTCATACATTAATCGGCGCCGGCGGCGCTGAAGGCGCAA
TCGACGCGTCCAATATTCTGAAACCGTCTCTTGCGCGCGGAGAGCTGCAATGTATCGGGGCCACAACTCTAGACGAATAT
CGTAAATACATTGAAAAAGACGCGGCCCTCGAACGGCGCTTCCAGCCGATTCAGGTTGATCAGCCTTCACCAGAGGAAAG
CATTCAGATTTTGAAAGGCTTGCGTGACCGCTATGAAGCCCATCACCGTGTATCCATTACAGATGAAGCGATCGAAGCGG
CCGTGAAGCTGTCAGACCGTTATATTTCTGACCGTTTCCTGCCTGACAAAGCGATCGATTTAATCGATGAAGCCGGTTCA
AAGGTTCGTCTGCGTTCATTTACAACGCCTCCTAACCTGAAAGAGCTTGAACAAAAACTCGATGAAGTCCGCAAAGAAAA
AGATGCCGCAGTTCAAAGCCAGGAATTTGAAAAAGCAGCGTCTTTGCGTGACACAGAACAGCGTTTGCGCGAACAGGTAG
AGGAAACGAAGAAAACGTGGAAAGAAAAGCAAGGACAAGAAAACTCCGAAGTGACAGTCGATGATATTGCGATGGTCGTA
TCCAGCTGGACCGGAGTGCCGGTTTCAAAAATCGCCCAGACTGAAACAGATAAGCTGCTGAATATGGAAAGCATTCTTCA
TTCACGTGTTATCGGTCAGGATGAAGCGGTTGTCGCCGTTGCGAAAGCTGTAAGGCGCGCTCGTGCGGGTCTAAAAGATC
CGAAGCGTCCGATCGGTTCGTTTATCTTCCTTGGTCCGACAGGTGTAGGTAAGACTGAGCTTGCCCGCGCTCTTGCCGAA
TCGATTTTCGGCGATGAGGAAGCGATGATTCGCATCGATATGTCAGAGTATATGGAGAAGCATTCAACATCACGGCTCGT
CGGTTCTCCTCCGGGATATGTCGGCTATGATGAGGGCGGACAGCTTACTGAAAAAGTAAGAAGAAAACCTTATTCTGTCG
TCCTGCTCGATGAAATTGAAAAAGCCCACCCCGACGTCTTCAATATTCTGCTGCAAGTGCTTGAAGACGGCCGTTTGACC
GATTCAAAAGGACGTACAGTCGACTTTAGAAATACGATCCTGATTATGACGTCAAACGTCGGCGCAAGCGAACTGAGAAG
AAATAAATACGTCGGATTTAACGTACAGGACGAAACGCAGAACTACAAAGATATGAAAGACAAGGTCATGGGCGAATTAA
AACGCGCCTTCAGACCGGAATTCATCAACCGGATTGATGAAATCATCGTTTTCCACTCCTTGGAGAAAAAACATTTGAAA
GACATCGTCTCCCTCATGTCAGACCAATTGACAAAGCGTCTGAAAGAACAGGATCTTTCAATTGAACTGACAGAAGCGGC
CAAAGAAAAAATCGCCGAAGAAGGGGTAGACCTTGAATACGGGGCCCGTCCGCTCAGAAGGGCCATCCAAAAGCATGTCG
AAGACCGGCTGTCTGAAGAGCTCTTGAAGGGCAACATTACAAAAGGACAGCACATCGTGCTCGATGTGGAAAACGGAGAG
TTTGTCGTAAAAACCGAAGCGAAAACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.296 |
100 |
0.963 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.124 |
99.506 |
0.499 |
| clpC | Streptococcus thermophilus LMG 18311 |
47.087 |
100 |
0.479 |
| clpC | Streptococcus thermophilus LMD-9 |
46.966 |
100 |
0.478 |
| clpC | Streptococcus pneumoniae Rx1 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus mutans UA159 |
43.728 |
100 |
0.452 |
| clpE | Streptococcus mutans UA159 |
53.467 |
80.123 |
0.428 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.276 |
78.642 |
0.411 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.291 |
76.914 |
0.41 |
| clpE | Streptococcus pneumoniae Rx1 |
53.291 |
76.914 |
0.41 |
| clpE | Streptococcus pneumoniae D39 |
53.291 |
76.914 |
0.41 |
| clpE | Streptococcus pneumoniae R6 |
53.291 |
76.914 |
0.41 |