Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NL113_RS03510 Genome accession   NZ_CP101130
Coordinates   720547..721515 (-) Length   322 a.a.
NCBI ID   WP_006636819.1    Uniprot ID   M5P9I1
Organism   Bacillus sp. KRF7     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 715547..726515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NL113_RS03480 - 715684..716658 (-) 975 WP_006636825.1 ABC transporter ATP-binding protein -
  NL113_RS03485 - 716837..717625 (-) 789 WP_006636824.1 DUF2268 domain-containing protein -
  NL113_RS03490 fabF 717706..718944 (-) 1239 WP_006636823.1 beta-ketoacyl-ACP synthase II -
  NL113_RS03495 - 718966..719904 (-) 939 WP_006636822.1 beta-ketoacyl-ACP synthase III -
  NL113_RS03500 - 720074..720325 (+) 252 WP_006636821.1 hypothetical protein -
  NL113_RS03505 comZ 720369..720557 (-) 189 WP_006636820.1 ComZ family protein Regulator
  NL113_RS03510 med 720547..721515 (-) 969 WP_006636819.1 BMP family ABC transporter substrate-binding protein Regulator
  NL113_RS03515 - 721601..722173 (-) 573 WP_006636818.1 hypothetical protein -
  NL113_RS03520 - 722265..722999 (-) 735 WP_006636817.1 hypothetical protein -
  NL113_RS03525 - 723238..723423 (+) 186 WP_006636816.1 YjzD family protein -
  NL113_RS03530 - 723503..723682 (-) 180 WP_006636815.1 YjzC family protein -
  NL113_RS03535 argF 723816..724766 (-) 951 WP_006636814.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35662.61 Da        Isoelectric Point: 5.2692

>NTDB_id=708942 NL113_RS03510 WP_006636819.1 720547..721515(-) (med) [Bacillus sp. KRF7]
MVYRLGVIFLILLVMSGCGQTPLNGKIEKVGLLVPDTISDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNEAAVKMAVED
FQKKGVNLIFGHGSEYEKVFNSISGNYPDIHFVLVNSKAEHKNVTSITFDGRAMGFFGGMTAAHQSKSGKLGILATHSWQ
PEVKGFIEGAKYINPDIKVKTEYVGQWDDSEKAVAKYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENIVLTSTIQHVDEAYELIADEFNKGTLKGGRRIFDIQDGVIEMGEFSPIVDQSFQEKIKGLIEQYKKQENCQMRGDPD
AA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=708942 NL113_RS03510 WP_006636819.1 720547..721515(-) (med) [Bacillus sp. KRF7]
ATGGTGTACAGGCTTGGCGTGATTTTTTTGATTCTCCTTGTCATGAGCGGCTGCGGACAAACGCCGCTGAATGGGAAAAT
TGAAAAAGTCGGGTTGCTTGTCCCTGATACAATAAGCGATCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAGTCTGTCTACAATGTCGATGTCTATTATAAAGAAGGAATCGATAATGAAGCCGCAGTCAAAATGGCTGTAGAAGAC
TTTCAGAAAAAAGGCGTCAACTTAATTTTCGGACATGGAAGCGAATATGAAAAAGTGTTTAACAGCATAAGCGGAAACTA
TCCCGATATTCATTTTGTGCTGGTGAACAGCAAAGCCGAGCATAAAAATGTGACAAGCATCACCTTTGACGGAAGGGCGA
TGGGGTTTTTTGGCGGCATGACCGCTGCACATCAATCAAAGTCGGGGAAACTCGGCATACTGGCCACACATTCGTGGCAG
CCTGAAGTGAAAGGATTCATCGAAGGTGCGAAATACATCAATCCGGACATTAAGGTCAAAACAGAATATGTCGGGCAGTG
GGACGACTCCGAAAAGGCCGTCGCCAAGTATGAAAAGATGAAAAAAGCGGGCGCGGATGTTGTGTATCCCGCCGGGGACG
GGTATAATGTCCCTGTCATAGAACAAATCAAAAAAGACGGTCTTTATGCGATCGGCTATGTCAGCGACCAGTCGGAGCTG
GGCGAGAACATCGTGCTCACAAGCACCATTCAGCATGTTGATGAAGCTTATGAGCTCATCGCAGACGAATTCAATAAAGG
GACGCTTAAGGGCGGCCGGCGGATTTTTGACATTCAGGACGGTGTGATAGAGATGGGCGAATTCAGCCCGATTGTCGATC
AGTCATTCCAGGAAAAAATAAAAGGGCTTATCGAACAATACAAAAAACAGGAAAACTGCCAAATGAGAGGTGATCCAGAT
GCAGCATGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M5P9I1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

66.343

95.963

0.637