Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NL113_RS03505 Genome accession   NZ_CP101130
Coordinates   720369..720557 (-) Length   62 a.a.
NCBI ID   WP_006636820.1    Uniprot ID   M5P9H2
Organism   Bacillus sp. KRF7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 715369..725557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NL113_RS03480 - 715684..716658 (-) 975 WP_006636825.1 ABC transporter ATP-binding protein -
  NL113_RS03485 - 716837..717625 (-) 789 WP_006636824.1 DUF2268 domain-containing protein -
  NL113_RS03490 fabF 717706..718944 (-) 1239 WP_006636823.1 beta-ketoacyl-ACP synthase II -
  NL113_RS03495 - 718966..719904 (-) 939 WP_006636822.1 beta-ketoacyl-ACP synthase III -
  NL113_RS03500 - 720074..720325 (+) 252 WP_006636821.1 hypothetical protein -
  NL113_RS03505 comZ 720369..720557 (-) 189 WP_006636820.1 ComZ family protein Regulator
  NL113_RS03510 med 720547..721515 (-) 969 WP_006636819.1 BMP family ABC transporter substrate-binding protein Regulator
  NL113_RS03515 - 721601..722173 (-) 573 WP_006636818.1 hypothetical protein -
  NL113_RS03520 - 722265..722999 (-) 735 WP_006636817.1 hypothetical protein -
  NL113_RS03525 - 723238..723423 (+) 186 WP_006636816.1 YjzD family protein -
  NL113_RS03530 - 723503..723682 (-) 180 WP_006636815.1 YjzC family protein -
  NL113_RS03535 argF 723816..724766 (-) 951 WP_006636814.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7047.14 Da        Isoelectric Point: 4.2412

>NTDB_id=708941 NL113_RS03505 WP_006636820.1 720369..720557(-) (comZ) [Bacillus sp. KRF7]
MQHEKSMEFLQIAMKYVPEAKEEMEKAGIELSPEMLQPFMTLFTKVMAEAYELGKTDAGSDS

Nucleotide


Download         Length: 189 bp        

>NTDB_id=708941 NL113_RS03505 WP_006636820.1 720369..720557(-) (comZ) [Bacillus sp. KRF7]
ATGCAGCATGAAAAATCAATGGAATTTTTACAAATCGCCATGAAATACGTGCCGGAAGCAAAGGAAGAAATGGAGAAGGC
GGGAATTGAGCTCTCGCCGGAGATGCTTCAGCCGTTTATGACGCTGTTTACCAAAGTGATGGCGGAAGCGTACGAACTTG
GCAAAACGGATGCTGGATCAGATTCTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M5P9H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

77.419

100

0.774