Detailed information NTG0070890

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: H7678_RS10525
• Genome accession: NZ_AP023393
• Coordinates: 2143098..2144204 (+)
• Length: 368 a.a.
• NCBI ID: WP_003061139.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain 89
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2138098..2149204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7678_RS10500 (SDSE89_20600)	pgsA	2138208..2138750 (-)	543	WP_003062173.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
H7678_RS10505 (SDSE89_20610)	-	2138764..2139795 (-)	1032	WP_003061371.1	helix-turn-helix domain-containing protein	-
H7678_RS10510 (SDSE89_20620)	-	2139845..2141128 (-)	1284	WP_015017517.1	pitrilysin family protein	-
H7678_RS10515 (SDSE89_20630)	-	2141130..2142374 (-)	1245	WP_048327866.1	pitrilysin family protein	-
H7678_RS10520 (SDSE89_20640)	yaaA	2142683..2143096 (+)	414	WP_003055132.1	S4 domain-containing protein YaaA	-
H7678_RS10525 (SDSE89_20650)	recF	2143098..2144204 (+)	1107	WP_003061139.1	DNA replication/repair protein RecF	Machinery gene
H7678_RS10530 (SDSE89_20660)	-	2144261..2145124 (-)	864	WP_003055126.1	GRP family sugar transporter	-
H7678_RS10535 (SDSE89_20670)	guaB	2145336..2146817 (-)	1482	WP_003060436.1	IMP dehydrogenase	-
H7678_RS10540 (SDSE89_20680)	trpS	2147033..2148055 (-)	1023	WP_042358028.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41878.74 Da
• Isoelectric Point: 7.8298

>NTDB_id=70890 H7678_RS10525 WP_003061139.1 2143098..2144204(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRVSGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGTRVMEHRIDFINALEKEANTHHQAISNGLENLSLSYQSSVVFDKRTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLVKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTIQVDSEIH

Nucleotide

• Length: 1107 bp

>NTDB_id=70890 H7678_RS10525 WP_003061139.1 2143098..2144204(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCATCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTGTTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGCGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGGGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAACCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAGCAAATTGATGCGGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAAC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCATTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAATCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAGAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTGGGCCCACATCGCGATGACTTAGCTTTTTA
CATTAACGGAATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAGTGAAGGCCTTGACTGGAGATAATCCTATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCATTCAAGTTGATTCTGAAATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.912	98.913	0.622
recF	Bacillus subtilis subsp. subtilis str. 168	45.455	100	0.462