Detailed information NTG0070869

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: K6J56_RS03630
• Genome accession: NZ_AP018768
• Coordinates: 715421..716113 (+)
• Length: 230 a.a.
• NCBI ID: WP_038440789.1
• Uniprot ID: A0AAJ8WR53
• Organism: Haemophilus influenzae strain CHBN-II-5 isolate 13H40
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 710421..721113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J56_RS03610 (CHBNII5_06870)	ampD	711698..712252 (-)	555	WP_044364862.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
K6J56_RS03615 (CHBNII5_06880)	pilA	712367..712816 (+)	450	WP_044364865.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
K6J56_RS03620 (CHBNII5_06890)	pilB	712813..714207 (+)	1395	WP_044364868.1	GspE/PulE family protein	Machinery gene
K6J56_RS03625 (CHBNII5_06900)	pilC	714204..715424 (+)	1221	WP_011271971.1	type II secretion system F family protein	Machinery gene
K6J56_RS03630 (CHBNII5_06910)	pilD	715421..716113 (+)	693	WP_038440789.1	A24 family peptidase	Machinery gene
K6J56_RS03635 (CHBNII5_06920)	rho	716167..717429 (-)	1263	WP_005629550.1	transcription termination factor Rho	-
K6J56_RS03640 (CHBNII5_06930)	metJ	717677..717994 (+)	318	WP_005631186.1	met regulon transcriptional regulator MetJ	-
K6J56_RS03645 (CHBNII5_06940)	cueR	718008..718394 (-)	387	WP_005663006.1	Cu(I)-responsive transcriptional regulator	-
K6J56_RS03650 (CHBNII5_06950)	-	718471..718677 (+)	207	WP_012054944.1	heavy-metal-associated domain-containing protein	-
K6J56_RS03655 (CHBNII5_06960)	-	718763..718969 (+)	207	WP_005648955.1	heavy-metal-associated domain-containing protein	-
K6J56_RS03660 (CHBNII5_06970)	-	719055..719261 (+)	207	WP_012054944.1	heavy-metal-associated domain-containing protein	-
K6J56_RS03665 (CHBNII5_06980)	-	719347..719553 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 26786.77 Da
• Isoelectric Point: 8.6895

>NTDB_id=70869 K6J56_RS03630 WP_038440789.1 715421..716113(+) (pilD) [Haemophilus influenzae strain CHBN-II-5 isolate 13H40]
MIYFTMFLLGGILGIALWFYLSGFITHLQQEIYATYVELFPQNSSPFQPHFASIQQKKCGHILRYFFSIGVGFIFLQIAF
KDSIFTVWIGLTLIILWTISYLDWHYQLISTTPCLWLLTLGLFGTDNNFSLLTLSESIKSAAIFFIVFYAIYWIAKCYYR
KEAFGRGDYWLAMALGSFIHLETLPHFLLLASVLGICFSLIHRKKKEFLPFAPFMNLSAVIIYFVKYYGY

Nucleotide

• Length: 693 bp

>NTDB_id=70869 K6J56_RS03630 WP_038440789.1 715421..716113(+) (pilD) [Haemophilus influenzae strain CHBN-II-5 isolate 13H40]
ATGATTTACTTCACAATGTTTTTATTAGGCGGCATCTTAGGGATCGCATTGTGGTTCTACCTATCTGGTTTTATTACGCA
TTTGCAGCAAGAGATTTATGCGACTTACGTTGAATTATTTCCACAAAACAGTTCTCCATTTCAACCGCACTTTGCCTCTA
TTCAACAAAAAAAGTGCGGTCATATTTTGAGGTATTTTTTTAGTATTGGGGTTGGATTTATATTTTTACAAATTGCCTTC
AAAGATTCTATTTTTACTGTATGGATCGGACTCACACTTATTATTCTTTGGACAATCAGTTATCTTGATTGGCACTATCA
ACTTATTTCTACGACACCCTGTTTATGGTTACTTACTCTAGGATTATTTGGCACAGACAATAACTTTTCATTGCTAACGT
TATCTGAAAGCATAAAAAGTGCGGCTATTTTTTTTATTGTTTTCTACGCAATCTATTGGATTGCAAAATGTTATTACAGA
AAAGAAGCCTTTGGACGGGGAGATTATTGGCTAGCAATGGCATTAGGAAGTTTTATTCATTTAGAAACCTTACCGCACTT
TTTATTATTAGCCTCAGTTCTTGGAATATGTTTTTCGCTTATTCATAGAAAGAAAAAAGAATTTTTACCTTTTGCCCCTT
TTATGAACTTATCAGCTGTCATCATTTATTTCGTCAAATATTACGGATATTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (92-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Haemophilus influenzae 86-028NP	97.391	100	0.974
pilD	Haemophilus influenzae Rd KW20	95.652	100	0.957