Detailed information NTG0070789

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: H7679_RS11245
• Genome accession: NZ_AP023392
• Coordinates: 2306377..2307471 (+)
• Length: 364 a.a.
• NCBI ID: WP_024395965.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DAT300
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2301377..2312471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7679_RS11220 (DAT300_21930)	pgsA	2301896..2302435 (-)	540	WP_014736596.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
H7679_RS11225 (DAT300_21940)	rodZ	2302445..2303302 (-)	858	WP_024395962.1	cytoskeleton protein RodZ	-
H7679_RS11230 (DAT300_21950)	yfmH	2303384..2304667 (-)	1284	WP_024395963.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
H7679_RS11235 (DAT300_21960)	yfmF	2304664..2305917 (-)	1254	WP_024395964.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
H7679_RS11240 (DAT300_21970)	yaaA	2305991..2306374 (+)	384	WP_014736600.1	S4 domain-containing protein YaaA	-
H7679_RS11245 (DAT300_21980)	recF	2306377..2307471 (+)	1095	WP_024395965.1	DNA replication/repair protein RecF	Machinery gene
H7679_RS11250 (DAT300_21990)	guaB	2307542..2309023 (-)	1482	WP_184495811.1	IMP dehydrogenase	-
H7679_RS11255 (DAT300_22000)	trpS	2309255..2310280 (-)	1026	WP_024395966.1	tryptophan--tRNA ligase	-
H7679_RS11260 (DAT300_22010)	-	2310635..2311507 (+)	873	WP_015647591.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42277.38 Da
• Isoelectric Point: 7.2328

>NTDB_id=70789 H7679_RS11245 WP_024395965.1 2306377..2307471(+) (recF) [Streptococcus suis strain DAT300]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIKLTDDVNLIDKFLT
ELERYRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=70789 H7679_RS11245 WP_024395965.1 2306377..2307471(+) (recF) [Streptococcus suis strain DAT300]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGTAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATCCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTATTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTAGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTTTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAAACCTCAATCAAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAATTGGAAAGGTATCGTAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTAGATAATAATCGTCAA
ATCAAACTACTAGAAACTATCACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.083	99.176	0.695
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442