Detailed information
Bioinformatically predicted
Overview
| Name | comGH | Type | Machinery gene |
| Locus tag | H7679_RS01070 | Genome accession | NZ_AP023392 |
| Coordinates | 163938..164891 (+) | Length | 317 a.a. |
| NCBI ID | WP_184495879.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain DAT300 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 158938..169891
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7679_RS01020 (DAT300_01700) | - | 160075..160341 (+) | 267 | WP_184495871.1 | hypothetical protein | - |
| H7679_RS01025 (DAT300_01710) | - | 160354..160809 (+) | 456 | WP_184495873.1 | hypothetical protein | - |
| H7679_RS01030 (DAT300_01720) | - | 160784..160987 (+) | 204 | WP_029751977.1 | phage holin | - |
| H7679_RS01035 (DAT300_01730) | - | 161117..161827 (+) | 711 | WP_184495875.1 | CHAP domain-containing protein | - |
| H7679_RS01040 (DAT300_01740) | prx | 161973..162158 (+) | 186 | WP_016056161.1 | hypothetical protein | Regulator |
| H7679_RS01045 (DAT300_01750) | comGC | 162159..162419 (+) | 261 | WP_184495877.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| H7679_RS01050 (DAT300_01760) | comGD | 162400..162807 (+) | 408 | WP_024395446.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| H7679_RS01055 (DAT300_01770) | comGE | 162779..163072 (+) | 294 | WP_024394703.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| H7679_RS01060 (DAT300_01780) | comGF/cglF | 163059..163493 (+) | 435 | WP_014637316.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| H7679_RS01065 (DAT300_01790) | comGG | 163471..163881 (+) | 411 | WP_044676305.1 | competence type IV pilus minor pilin ComGG | - |
| H7679_RS01070 (DAT300_01800) | comGH | 163938..164891 (+) | 954 | WP_184495879.1 | class I SAM-dependent methyltransferase | Machinery gene |
| H7679_RS01075 (DAT300_01810) | - | 164941..166128 (+) | 1188 | WP_024401510.1 | acetate kinase | - |
| H7679_RS01080 (DAT300_01820) | - | 166443..166994 (+) | 552 | WP_024395442.1 | folate family ECF transporter S component | - |
| H7679_RS01085 (DAT300_01830) | - | 167050..168306 (+) | 1257 | WP_024395441.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| H7679_RS01090 (DAT300_01840) | pepA | 168351..169412 (-) | 1062 | WP_024395440.1 | glutamyl aminopeptidase | - |
| H7679_RS01095 (DAT300_01850) | - | 169559..169843 (+) | 285 | WP_024395439.1 | DUF4651 domain-containing protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35774.88 Da Isoelectric Point: 4.4442
>NTDB_id=70715 H7679_RS01070 WP_184495879.1 163938..164891(+) (comGH) [Streptococcus suis strain DAT300]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKNGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLMPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKNGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLMPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=70715 H7679_RS01070 WP_184495879.1 163938..164891(+) (comGH) [Streptococcus suis strain DAT300]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAAATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGATGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAAATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGATGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGH | Streptococcus mutans UA140 |
60.443 |
99.685 |
0.603 |
| comGH | Streptococcus mutans UA159 |
60.127 |
99.685 |
0.599 |