Detailed information NTG0070692

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: H7677_RS10355
• Genome accession: NZ_AP023391
• Coordinates: 2113761..2114855 (+)
• Length: 364 a.a.
• NCBI ID: WP_172059650.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DAT299
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2108761..2119855

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7677_RS10330 (DAT299_20110)	pgsA	2109286..2109825 (-)	540	WP_014736596.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
H7677_RS10335 (DAT299_20120)	rodZ	2109835..2110692 (-)	858	WP_184493662.1	cytoskeleton protein RodZ	-
H7677_RS10340 (DAT299_20130)	yfmH	2110774..2112057 (-)	1284	WP_184493664.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
H7677_RS10345 (DAT299_20140)	yfmF	2112054..2113307 (-)	1254	WP_184493666.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
H7677_RS10350 (DAT299_20150)	yaaA	2113381..2113758 (+)	378	WP_172059652.1	S4 domain-containing protein YaaA	-
H7677_RS10355 (DAT299_20160)	recF	2113761..2114855 (+)	1095	WP_172059650.1	DNA replication/repair protein RecF	Machinery gene
H7677_RS10360 (DAT299_20170)	guaB	2114927..2116408 (-)	1482	WP_172059648.1	IMP dehydrogenase	-
H7677_RS10365 (DAT299_20180)	trpS	2116639..2117664 (-)	1026	WP_184493668.1	tryptophan--tRNA ligase	-
H7677_RS10370 (DAT299_20190)	-	2118019..2118891 (+)	873	WP_015647591.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42203.27 Da
• Isoelectric Point: 7.0556

>NTDB_id=70692 H7677_RS10355 WP_172059650.1 2113761..2114855(+) (recF) [Streptococcus suis strain DAT299]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIKLTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGNVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=70692 H7677_RS10355 WP_172059650.1 2113761..2114855(+) (recF) [Streptococcus suis strain DAT299]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCTGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAAACCTCAATCAAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAATTGGAACGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAATGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	69.806	99.176	0.692
recF	Bacillus subtilis subsp. subtilis str. 168	43.989	100	0.442